Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SB03G034810
(Sorghum bicolor)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Sorghum bicolor | Orthologous gene family | SB03G034810 SB09G025580 | 2 |  |
| Anchor point | SB09G025580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SB03G034810 | 1 | ||
| Tree-based ortholog | SB03G034810 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G28520 | 1 | |
| Tree-based ortholog | 1-to-many | AT2G42400 AT1G28520 | 2 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-many | BD2G19820 BD2G50070 | 2 | |
| Anchor point | 1-to-many | BD2G50070 BD2G19820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G50070 | 1 | ||
| Tree-based ortholog | 1-to-1 | BD2G50070 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00007G00070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00007G00070 | 1 | ||
| Tree-based ortholog | 1-to-many | CP00050G00030 CP00007G00070 | 2 | ||
| Hordeum vulgare | Orthologous gene family | many-to-1 | HV1561237G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV68202G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | HV68202G00010 | 1 | ||
| Musa acuminata | Anchor point | 1-to-many | MA06G22850 MA04G15500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA10G26650 MA07G11250 | 2 | ||
| Tree-based ortholog | 1-to-many | MA01G28470 MA06G22850 MA04G15500 | 3 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_01G51810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G51810 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_01G51810 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS01G54930 OS05G43950 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G54930 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS01G54930 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00218G00300 PP00113G00190 | 2 | |
| Tree-based ortholog | 1-to-many | PP00113G00190 PP00218G00300 | 2 | ||
| Populus trichocarpa | Anchor point | 1-to-1 | PT13G12310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G05090 PT11G06000 | 2 | ||
| Tree-based ortholog | 1-to-many | PT13G12310 PT19G09280 PT11G06000 ... | 4 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI005G32780 | 1 | |
| Anchor point | 1-to-many | SI005G32780 SI003G18180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI005G32780 | 1 | ||
| Tree-based ortholog | 1-to-1 | SI005G32780 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL02G077450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL10G008880 SL02G077450 | 2 | ||
| Tree-based ortholog | 1-to-many | SL02G077450 SL10G008880 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV10G01590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G01590 | 1 | ||
| Tree-based ortholog | 1-to-many | VV12G02360 VV10G01590 | 2 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G40520 ZM03G14300 ZM03G32140 | 3 | |
| Anchor point | 1-to-many | ZM03G32140 ZM08G34840 ZM06G28530 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G34840 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM08G34840 | 1 |