Integrative Orthology Viewer: SB02G040490 (Sorghum bicolor)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Sorghum bicolor | Orthologous gene family | SB02G040490 SB03G013620 SB10G006050 ... | 6 | |
Anchor point | SB01G034290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SB02G040500 SB02G040490 SB02G040510 | 3 | ||
Tree-based ortholog | SB02G040490 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT2G46950 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT4G27710 AT2G46950 AT2G46960 | 3 | ||
Tree-based ortholog | 1-to-many | AT4G27710 AT2G46950 | 2 | ||
Brachypodium distachyon | Orthologous gene family | many-to-1 | BD1G61420 | 1 | |
Anchor point | 1-to-many | BD1G20240 BD1G61407 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BD1G20260 BD1G20240 | 2 | ||
Tree-based ortholog | 1-to-many | BD1G20260 BD1G20240 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00064G00640 | 1 | |
Tree-based ortholog | 1-to-many | CP00077G00790 CP00077G00840 CP30627G00020 ... | 6 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G14100 | 1 | |
Tree-based ortholog | 1-to-many | CR01G11620 CR07G07310 CR07G09910 ... | 11 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV275993G00010 HV161581G00010 | 2 | |
Tree-based ortholog | 1-to-1 | HV1566145G00010 | 1 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA03G08630 MA11G00420 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G00420 MA09G17250 MA03G08630 | 3 | ||
Tree-based ortholog | 1-to-many | MA03G08630 MA11G00420 | 2 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_04G35120 OSINDICA_06G08540 OSINDICA_07G36030 | 3 | |
Anchor point | 1-to-many | OSINDICA_03G24390 OSINDICA_07G36030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G36060 | 1 | ||
Tree-based ortholog | 1-to-many | OSINDICA_07G36030 OSINDICA_04G35120 OSINDICA_07G23630 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G25480 OS06G09210 OS06G09220 ... | 4 | |
Anchor point | 1-to-many | OS03G25480 OS07G44110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G23570 | 1 | ||
Tree-based ortholog | 1-to-many | OS07G44110 OS07G44130 OS07G44140 ... | 4 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL13G02350 OL21G00650 | 2 | |
Tree-based ortholog | 1-to-many | OL03G03620 OL08G01420 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00235G00530 PP00022G00080 PP00155G00070 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00178G00350 PP00115G00680 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT06G02220 | 1 | |
Anchor point | 1-to-1 | PT14G11130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT06G02220 | 1 | ||
Tree-based ortholog | 1-to-many | PT06G02220 PT14G11130 | 2 | ||
Setaria italica | Orthologous gene family | many-to-many | SI004G03640 SI004G04420 SI009G40380 | 3 | |
Anchor point | 1-to-many | SI009G40350 SI002G41360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G41370 | 1 | ||
Tree-based ortholog | 1-to-1 | SI002G41370 | 1 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL07G055540 SL07G062510 SL07G055350 ... | 14 | |
Tree-based ortholog | 1-to-many | SL07G025370 SL04G080100 SL07G041500 ... | 15 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV07G10220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G10220 | 1 | ||
Tree-based ortholog | 1-to-1 | VV07G10220 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G15330 ZM06G15340 ZM09G20520 | 3 | |
Anchor point | 1-to-many | ZM07G28290 ZM09G20510 ZM01G16470 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM02G39620 ZM02G39610 | 2 | ||
Tree-based ortholog | 1-to-many | ZM02G39620 ZM02G39610 | 2 |