Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SB01G028160
(Sorghum bicolor)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Sorghum bicolor | Orthologous gene family | SB01G028160 SB02G030470 SB03G008090 ... | 6 |  |
| Best-Hits-and-Inparalogs(BHI)family | SB01G028160 | 1 | ||
| Tree-based ortholog | SB01G028160 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G05230 AT4G00730 AT4G04890 ... | 4 | |
| Anchor point | N/A | AT5G46880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G46880 | 1 | ||
| Tree-based ortholog | 1-to-many | AT4G17710 AT5G46880 | 2 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-many | BD3G57567 BD4G35760 BD5G22570 | 3 | |
| Anchor point | N/A | BD3G34410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G34410 | 1 | ||
| Tree-based ortholog | 1-to-1 | BD3G34410 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00007G01380 CP00090G00050 CP00098G00020 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00090G00050 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00090G00050 | 1 | ||
| Hordeum vulgare | Orthologous gene family | many-to-many | HV37272G00010 HV37438G00010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV37272G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | HV37272G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-many | MA02G15460 MA03G12680 MA05G10740 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA04G19550 MA05G14520 | 2 | ||
| Tree-based ortholog | 1-to-many | MA05G14520 MA04G19550 | 2 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_02G43620 OSINDICA_04G40270 OSINDICA_04G45710 ... | 6 | |
| Anchor point | N/A | OSINDICA_10G32740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_10G32740 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_10G32740 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G45250 OS04G53540 OS06G10600 ... | 4 | |
| Anchor point | N/A | OS10G42490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G42490 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS10G42490 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00059G00720 PP00084G01160 PP00173G00480 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00059G00720 PP00084G01160 PP00173G00480 ... | 4 | ||
| Tree-based ortholog | 1-to-many | PP00173G00480 PP00209G00060 PP00084G01160 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G13780 PT01G18410 PT12G03850 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G09600 PT01G13780 | 2 | ||
| Tree-based ortholog | 1-to-many | PT03G09600 PT01G13780 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-many | SI005G08090 SI009G32000 | 2 | |
| Anchor point | N/A | SI009G32000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G32000 | 1 | ||
| Tree-based ortholog | 1-to-1 | SI009G32000 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G041850 SL10G005330 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G076370 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL08G076370 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV02G01740 VV15G07980 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G01740 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV02G01740 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G03810 ZM03G06790 ZM09G01790 ... | 4 | |
| Anchor point | N/A | ZM01G22370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G22370 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM01G22370 | 1 |