Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT18G11490
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT18G11490 | 1 |  |
| Anchor point | PT06G19060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT06G19060 PT18G11490 | 2 | ||
| Tree-based ortholog | PT06G19060 PT18G11490 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G06220 AT5G25230 | 2 | |
| Tree-based ortholog | many-to-many | AT1G06220 AT5G25230 | 2 | ||
| Brachypodium distachyon | Orthologous gene family | 1-to-1 | BD1G36340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G36340 | 1 | ||
| Tree-based ortholog | many-to-1 | BD1G36340 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00007G00800 | 1 | |
| Tree-based ortholog | many-to-1 | CP00007G00800 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR17G09270 | 1 | |
| Tree-based ortholog | many-to-1 | CR17G09270 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV346502G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV246308G00010 HV346502G00010 | 2 | ||
| Musa acuminata | Orthologous gene family | 1-to-1 | MA10G21870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA04G09510 | 1 | ||
| Tree-based ortholog | many-to-1 | MA04G09510 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | 1-to-1 | OSINDICA_06G36320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G36320 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_06G36320 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS06G40600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G40600 | 1 | ||
| Tree-based ortholog | many-to-1 | OS06G40600 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL07G00350 | 1 | |
| Tree-based ortholog | many-to-1 | OL07G00350 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00117G00550 PP00214G00170 | 2 | |
| Tree-based ortholog | many-to-many | PP00117G00550 PP00214G00170 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G22590 | 1 | |
| Tree-based ortholog | many-to-1 | SI004G22590 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL07G007210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G007210 | 1 | ||
| Tree-based ortholog | many-to-1 | SL07G007210 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G023820 | 1 | |
| Tree-based ortholog | many-to-1 | SB10G023820 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV11G01650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G01650 | 1 | ||
| Tree-based ortholog | many-to-1 | VV11G01650 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G14090 | 1 | |
| Tree-based ortholog | many-to-many | ZM09G14080 ZM09G14090 | 2 |