Integrative Orthology Viewer: PT18G11130 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT06G18800 PT18G11130 | 2 | |
Anchor point | PT06G18800 PT06G26210 PT18G02130 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT18G11130 PT06G18800 | 2 | ||
Tree-based ortholog | PT18G11130 PT06G18800 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-many | AT4G31920 AT5G58080 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT2G25180 AT4G31920 | 2 | ||
Tree-based ortholog | many-to-1 | AT2G25180 | 1 | ||
Brachypodium distachyon | Anchor point | many-to-many | BD1G47400 BD3G54120 BD1G30810 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G54120 | 1 | ||
Tree-based ortholog | many-to-many | BD3G06120 BD3G54120 BD1G47400 | 3 | ||
Carica papaya | Anchor point | many-to-1 | CP00046G01190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00046G01190 | 1 | ||
Tree-based ortholog | many-to-1 | CP00046G01190 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR05G02030 | 1 | |
Tree-based ortholog | many-to-many | CR09G10410 CR17G00150 CR02G02460 ... | 4 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV134485G00010 | 1 | |
Tree-based ortholog | many-to-many | HV134485G00010 HV70355G00010 HV45950G00020 ... | 4 | ||
Musa acuminata | Anchor point | many-to-many | MA05G17000 MA03G13700 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G08470 MA02G05260 MA03G13700 ... | 4 | ||
Tree-based ortholog | many-to-many | MA00G19540 MA05G17000 MA10G06150 ... | 6 | ||
Oryza sativa ssp. indica | Anchor point | many-to-many | OSINDICA_06G07780 OSINDICA_02G53540 OSINDICA_02G08300 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G08300 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_02G08300 OSINDICA_02G53540 OSINDICA_06G07780 | 3 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-many | OS06G08440 OS02G08500 OS06G43910 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G55320 | 1 | ||
Tree-based ortholog | many-to-many | OS02G08500 OS02G55320 OS06G08440 | 3 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G02810 | 1 | |
Tree-based ortholog | many-to-1 | OL12G01860 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00362G00080 PP00010G01550 PP00016G01860 | 3 | |
Tree-based ortholog | many-to-many | PP00311G00120 PP00031G01840 PP00029G00100 ... | 6 | ||
Setaria italica | Orthologous gene family | many-to-1 | SI004G05140 | 1 | |
Anchor point | many-to-many | SI004G05140 SI001G36700 SI004G20310 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G05140 | 1 | ||
Tree-based ortholog | many-to-many | SI001G06460 SI001G36700 SI004G05140 | 3 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL07G005140 SL12G010330 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL12G010330 SL07G005140 | 2 | ||
Tree-based ortholog | many-to-many | SL07G005140 SL12G010330 | 2 | ||
Sorghum bicolor | Anchor point | many-to-many | SB04G035980 SB04G005580 SB10G005580 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G005580 | 1 | ||
Tree-based ortholog | many-to-many | SB04G005580 SB04G035980 SB10G005580 | 3 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV11G00370 | 1 | |
Anchor point | many-to-many | VV11G00370 VV04G12560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G00370 | 1 | ||
Tree-based ortholog | many-to-1 | VV11G00370 | 1 | ||
Zea mays | Anchor point | many-to-many | ZM05G43170 ZM05G21380 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G02850 | 1 | ||
Tree-based ortholog | many-to-many | ZM05G21380 ZM05G43170 ZM09G02850 | 3 |