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Integrative Orthology Viewer:
PT17G12940
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT17G12940 | 1 |  |
| Anchor point | PT04G08750 PT08G13240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT17G12940 PT04G08750 | 2 | ||
| Tree-based ortholog | PT04G08750 PT17G12940 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | many-to-1 | AT1G48620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G14900 | 1 | ||
| Tree-based ortholog | many-to-many | AT3G18035 AT1G48620 AT1G14900 | 3 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G36390 | 1 | |
| Tree-based ortholog | many-to-many | BD1G11350 BD3G36390 BD4G29846 | 3 | ||
| Carica papaya | Anchor point | many-to-1 | CP00116G00540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00116G00540 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00116G00540 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV139442G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV139442G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA05G06070 | 1 | |
| Tree-based ortholog | many-to-many | MA09G29260 MA07G10560 MA05G25090 ... | 6 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_05G46050 | 1 | |
| Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS03G50355 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G33190 | 1 | ||
| Tree-based ortholog | many-to-many | OS03G50355 OS08G33190 OS09G23730 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00033G01410 PP00072G01020 PP00027G00630 ... | 4 | |
| Setaria italica | Anchor point | many-to-1 | SI009G11890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G20570 | 1 | ||
| Tree-based ortholog | many-to-many | SI009G11890 SI002G20570 SI007G29600 | 3 | ||
| Solanum lycopersicum | Anchor point | many-to-1 | SL05G051290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL05G051290 SL11G011160 | 2 | ||
| Tree-based ortholog | many-to-many | SL05G051290 SL11G011160 | 2 | ||
| Sorghum bicolor | Anchor point | many-to-1 | SB01G010370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G020920 | 1 | ||
| Tree-based ortholog | many-to-many | SB01G010370 SB08G001660 SB07G020920 ... | 9 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV01G06210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV01G06210 VV09G01240 VV13G11900 | 3 | ||
| Tree-based ortholog | many-to-many | VV17G07000 VV13G11900 VV09G01240 ... | 4 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G13840 | 1 | |
| Tree-based ortholog | many-to-many | ZM01G50530 ZM05G05590 ZM04G13840 ... | 5 |