Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT17G11200
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT17G11200 | 1 |  |
| Anchor point | PT08G11580 PT10G13020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT17G11200 | 1 | ||
| Tree-based ortholog | PT17G11200 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | many-to-1 | AT1G67260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G67260 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT1G67260 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G11060 | 1 | |
| Tree-based ortholog | 1-to-many | BD3G36590 BD4G29980 | 2 | ||
| Carica papaya | Anchor point | many-to-1 | CP00179G00280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00179G00280 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00179G00280 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV135325G00010 | 1 | |
| Tree-based ortholog | 1-to-many | HV42387G00010 HV135325G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA02G23060 MA02G21590 | 2 | |
| Tree-based ortholog | 1-to-many | MA02G23060 MA02G21590 MA10G26020 | 3 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_08G31570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G48200 | 1 | ||
| Tree-based ortholog | 1-to-many | OSINDICA_08G31570 OSINDICA_09G18630 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS08G33530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G49880 | 1 | ||
| Tree-based ortholog | 1-to-many | OS08G33530 OS09G24480 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00332G00220 PP00207G00640 | 2 | |
| Tree-based ortholog | 1-to-many | PP00207G00640 PP00332G00220 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G12320 | 1 | |
| Tree-based ortholog | 1-to-many | SI006G15730 SI002G20760 | 2 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL03G045030 SL02G089830 SL04G006980 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL04G006980 SL05G009900 | 2 | ||
| Tree-based ortholog | 1-to-many | SL06G069240 SL03G119770 SL05G009900 ... | 4 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G010690 | 1 | |
| Tree-based ortholog | 1-to-many | SB07G021140 SB02G024450 | 2 | ||
| Vitis vinifera | Anchor point | many-to-many | VV01G08300 VV14G15350 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G15350 | 1 | ||
| Tree-based ortholog | 1-to-many | VV17G05570 VV01G08300 VV14G15350 | 3 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G50100 | 1 | |
| Tree-based ortholog | 1-to-many | ZM02G08370 ZM04G00810 ZM04G10930 ... | 8 |