Integrative Orthology Viewer: PT17G11170 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT04G10380 PT17G11170 | 2 | |
Anchor point | PT04G10380 PT10G13110 PT08G11520 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT04G10380 PT17G11170 | 2 | ||
Tree-based ortholog | PT17G11170 PT04G10380 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-many | AT1G26100 AT5G38630 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G38630 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G38630 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-1 | BD3G34910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G34910 | 1 | ||
Tree-based ortholog | many-to-1 | BD3G34910 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00818G00010 | 1 | |
Anchor point | many-to-1 | CP00001G02240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00818G00010 | 1 | ||
Tree-based ortholog | many-to-1 | CP00818G00010 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G05600 | 1 | |
Tree-based ortholog | many-to-1 | CR13G05600 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV2548556G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV2548556G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA01G26170 MA04G06610 | 2 | |
Tree-based ortholog | many-to-many | MA04G06610 MA01G26170 | 2 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_08G27700 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_08G27700 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_08G27700 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G29520 | 1 | |
Tree-based ortholog | many-to-1 | OS08G29520 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00194G00140 PP00210G00160 | 2 | |
Tree-based ortholog | many-to-many | PP00210G00160 PP00194G00140 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI006G12810 | 1 | |
Tree-based ortholog | many-to-1 | SI006G12810 | 1 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL05G009950 SL02G065580 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G065580 | 1 | ||
Tree-based ortholog | many-to-1 | SL02G065580 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G019370 | 1 | |
Tree-based ortholog | many-to-1 | SB07G019370 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV14G15380 | 1 | |
Anchor point | many-to-many | VV14G15380 VV01G08350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G15380 | 1 | ||
Tree-based ortholog | many-to-1 | VV14G15380 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G39260 | 1 | |
Tree-based ortholog | many-to-1 | ZM01G39260 | 1 |