Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT17G08070
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT17G08070 | 1 |  |
| Anchor point | PT12G06910 PT04G12870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT17G08070 | 1 | ||
| Tree-based ortholog | PT00G00150 PT04G12870 PT17G08070 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G18800 | 1 | |
| Tree-based ortholog | many-to-many | AT1G74560 AT1G18800 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G46800 | 1 | |
| Tree-based ortholog | many-to-1 | BD3G46800 | 1 | ||
| Carica papaya | Anchor point | many-to-1 | CP00014G00090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01815G00010 | 1 | ||
| Tree-based ortholog | many-to-many | CP00051G01590 CP00014G00090 CP00014G00100 | 3 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G15030 | 1 | |
| Tree-based ortholog | many-to-1 | CR06G15030 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | HV45390G00010 HV2549044G00010 | 2 | |
| Tree-based ortholog | many-to-many | HV2549044G00010 HV45390G00010 | 2 | ||
| Musa acuminata | Anchor point | many-to-1 | MA04G00490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA07G21490 MA04G00490 | 2 | ||
| Tree-based ortholog | many-to-many | MA10G19260 MA06G10950 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_04G30210 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_02G35500 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G36710 | 1 | |
| Tree-based ortholog | many-to-1 | OS02G36710 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL13G01060 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00003G00670 | 1 | |
| Tree-based ortholog | many-to-many | PP00003G00690 PP00003G00670 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI001G21750 | 1 | |
| Tree-based ortholog | many-to-1 | SI001G21750 | 1 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL02G067370 SL06G069890 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G067370 | 1 | ||
| Tree-based ortholog | many-to-many | SL02G021350 SL03G116170 SL06G069890 ... | 4 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB04G023870 | 1 | |
| Tree-based ortholog | many-to-1 | SB04G023870 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G03840 | 1 | |
| Tree-based ortholog | many-to-1 | VV14G01980 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G17230 | 1 | |
| Tree-based ortholog | many-to-many | ZM04G17230 ZM05G31700 | 2 |