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Integrative Orthology Viewer:
PT17G06300
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G32480 PT17G06300 | 2 |  |
| Anchor point | PT01G32480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT01G32480 PT17G06300 | 2 | ||
| Tree-based ortholog | PT01G32480 PT17G06300 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT5G41100 AT3G26910 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G33490 | 1 | ||
| Tree-based ortholog | many-to-many | AT3G26910 AT5G41100 | 2 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD5G08690 | 1 | |
| Anchor point | 1-to-1 | BD4G34820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G08690 | 1 | ||
| Tree-based ortholog | many-to-many | BD4G34820 BD5G08690 BD3G44310 | 3 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00070G01030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00070G01030 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00070G01030 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV127738G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV39379G00010 HV127738G00010 HV2555653G00010 | 3 | ||
| Musa acuminata | Orthologous gene family | many-to-1 | MA08G00610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA08G00610 MA11G11190 | 2 | ||
| Tree-based ortholog | many-to-many | MA08G00610 MA11G11190 MA09G30020 ... | 4 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G26760 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_09G26760 OSINDICA_04G24390 OSINDICA_02G29960 | 3 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS09G33510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G32370 | 1 | ||
| Tree-based ortholog | many-to-many | OS09G33510 OS04G32370 OS02G31080 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00130G00430 PP00138G00950 | 2 | |
| Tree-based ortholog | many-to-many | PP00138G00950 PP00130G00430 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI007G08130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI007G08130 | 1 | ||
| Tree-based ortholog | many-to-many | SI002G27540 SI007G08130 SI001G18400 | 3 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G009820 | 1 | |
| Anchor point | 1-to-1 | SL02G094410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G094410 | 1 | ||
| Tree-based ortholog | many-to-1 | SL02G094410 | 1 | ||
| Sorghum bicolor | Orthologous gene family | many-to-1 | SB06G014370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G014370 | 1 | ||
| Tree-based ortholog | many-to-many | SB02G029480 SB06G014370 SB04G021040 | 3 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV14G14010 | 1 | |
| Anchor point | 1-to-1 | VV14G14010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G14010 | 1 | ||
| Tree-based ortholog | many-to-1 | VV14G14010 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G15550 | 1 | |
| Tree-based ortholog | many-to-many | ZM02G33380 ZM07G18500 ZM10G15550 ... | 5 |