Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT17G05050
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT17G05050 | 1 |  |
| Anchor point | PT01G31060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT01G31060 PT17G05050 | 2 | ||
| Tree-based ortholog | PT01G31060 PT17G05050 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-1 | AT5G64280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G64290 | 1 | ||
| Tree-based ortholog | many-to-1 | AT5G64290 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G38580 | 1 | |
| Tree-based ortholog | many-to-1 | BD3G59470 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP31478G00010 | 1 | |
| Tree-based ortholog | many-to-1 | CP31478G00010 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G02740 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV133539G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV111665G00010 | 1 | ||
| Musa acuminata | Anchor point | 1-to-1 | MA10G25320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA10G31090 | 1 | ||
| Tree-based ortholog | many-to-many | MA05G18410 MA10G31090 | 2 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_08G35900 OSINDICA_09G23620 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G23620 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_08G35900 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS09G29430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G29430 | 1 | ||
| Tree-based ortholog | many-to-1 | OS08G37600 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL17G00680 | 1 | |
| Tree-based ortholog | many-to-1 | OL04G03970 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00007G01650 PP00313G00240 PP00163G00260 | 3 | |
| Setaria italica | Anchor point | 1-to-1 | SI006G18700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G24330 | 1 | ||
| Tree-based ortholog | many-to-many | SI002G24330 SI009G38730 | 2 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL01G105540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G105540 | 1 | ||
| Tree-based ortholog | many-to-1 | SL11G010290 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G027290 | 1 | |
| Tree-based ortholog | many-to-1 | SB02G027290 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV03G01290 | 1 | |
| Tree-based ortholog | many-to-1 | VV03G01290 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G32160 | 1 | |
| Tree-based ortholog | many-to-many | ZM01G30910 ZM07G16860 ZM02G32160 | 3 |