Integrative Orthology Viewer: PT17G04620 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G01530 PT01G01540 PT08G17800 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | PT01G01560 PT01G01550 PT01G01540 ... | 4 | ||
Tree-based ortholog | PT01G01550 PT01G01560 PT17G04620 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G17420 AT3G45140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G45140 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G45140 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G72690 BD3G39980 BD3G59710 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BD3G07010 BD3G07000 | 2 | ||
Tree-based ortholog | many-to-many | BD3G39980 BD3G07010 BD3G07000 | 3 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00025G01270 CP00458G00020 CP00458G00030 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00458G00030 | 1 | ||
Tree-based ortholog | many-to-1 | CP00458G00030 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G02920 | 1 | |
Tree-based ortholog | many-to-1 | CR12G02920 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV2548257G00010 HV37134G00010 HV43209G00010 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV37134G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV52777G00010 HV37134G00010 HV52406G00010 ... | 6 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA00G20430 MA03G07980 MA06G25760 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA03G12050 | 1 | ||
Tree-based ortholog | many-to-many | MA09G12730 MA03G12050 | 2 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_02G09590 OSINDICA_03G47650 OSINDICA_05G21210 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_08G38240 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_08G38240 OSINDICA_08G38300 OSINDICA_08G38150 ... | 7 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G10120 OS03G08220 OS08G39840 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G10120 | 1 | ||
Tree-based ortholog | many-to-many | OS08G39850 OS08G39840 OS02G10120 ... | 6 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL07G01910 | 1 | |
Tree-based ortholog | many-to-1 | OL07G01910 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00036G01900 PP00097G01010 PP00232G00410 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00070G00750 | 1 | ||
Tree-based ortholog | many-to-many | PP00190G00290 PP00070G00750 PP00312G00290 | 3 | ||
Setaria italica | Orthologous gene family | many-to-many | SI001G05340 SI003G30240 SI006G20400 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G05340 | 1 | ||
Tree-based ortholog | many-to-many | SI006G20400 SI001G05340 SI004G22010 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G099150 SL03G122340 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL01G006560 SL12G011040 SL01G006540 | 3 | ||
Tree-based ortholog | many-to-many | SL01G009680 SL01G006560 SL01G006540 ... | 4 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB06G018040 SB06G031350 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G027760 | 1 | ||
Tree-based ortholog | many-to-1 | SB07G027760 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G03950 VV06G06620 VV06G06630 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV06G06640 VV06G06620 VV06G06630 | 3 | ||
Tree-based ortholog | many-to-many | VV06G06630 VV06G06640 VV06G06650 ... | 4 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G05460 ZM01G32540 ZM02G01840 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM04G38240 ZM05G23630 | 2 | ||
Tree-based ortholog | many-to-many | ZM01G32540 ZM04G38240 ZM05G23630 | 3 |