Integrative Orthology Viewer: PT16G05040 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT06G05770 PT16G05040 | 2 | |
Anchor point | PT01G27010 PT06G05770 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT16G05040 PT06G05770 | 2 | ||
Tree-based ortholog | PT16G05040 PT06G05770 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G12160 | 1 | |
Anchor point | many-to-1 | AT3G12160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G12160 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G12160 | 1 | ||
Brachypodium distachyon | Anchor point | many-to-1 | BD1G36820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G27130 | 1 | ||
Tree-based ortholog | many-to-1 | BD4G27130 | 1 | ||
Carica papaya | Anchor point | many-to-1 | CP00085G01150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00085G01150 | 1 | ||
Tree-based ortholog | many-to-1 | CP00085G01150 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G10450 | 1 | |
Tree-based ortholog | many-to-many | CR09G05770 CR12G12840 CR15G01760 ... | 5 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV191777G00010 | 1 | |
Tree-based ortholog | many-to-many | HV39557G00010 HV245198G00010 | 2 | ||
Musa acuminata | Anchor point | many-to-many | MA03G12080 MA01G20390 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA03G12080 MA01G20390 | 2 | ||
Tree-based ortholog | many-to-1 | MA03G12080 | 1 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_10G15070 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_06G45730 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G10940 | 1 | |
Tree-based ortholog | many-to-1 | OS09G10940 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL02G04790 | 1 | |
Tree-based ortholog | many-to-many | OL07G00720 OL05G02240 OL06G02110 ... | 6 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00044G00280 PP00010G01320 PP00196G00370 | 3 | |
Tree-based ortholog | many-to-many | PP00348G00120 PP00274G00020 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G16590 | 1 | |
Tree-based ortholog | many-to-1 | SI002G16590 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G064020 | 1 | |
Anchor point | many-to-many | SL01G086850 SL03G064020 SL10G079030 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL03G064020 SL10G079030 | 2 | ||
Tree-based ortholog | many-to-1 | SL03G064020 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G018890 | 1 | |
Tree-based ortholog | many-to-1 | SB02G018890 | 1 | ||
Vitis vinifera | Anchor point | many-to-many | VV13G07460 VV08G08040 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G08040 | 1 | ||
Tree-based ortholog | many-to-1 | VV13G07460 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G28750 | 1 | |
Tree-based ortholog | many-to-many | ZM01G06330 ZM05G11910 | 2 |