Integrative Orthology Viewer: PT16G00620 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT06G00560 PT16G00620 | 2 | |
Anchor point | PT06G00560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT16G00620 PT06G00560 | 2 | ||
Tree-based ortholog | PT06G00560 PT16G00620 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-many | AT4G17215 AT5G47635 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT5G47635 AT2G40113 AT4G17215 | 3 | ||
Tree-based ortholog | many-to-many | AT2G40113 AT5G47635 AT4G17215 | 3 | ||
Brachypodium distachyon | Orthologous gene family | many-to-1 | BD3G15970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G15970 | 1 | ||
Tree-based ortholog | many-to-1 | BD3G15970 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00027G02380 | 1 | |
Anchor point | 1-to-1 | CP00027G02380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00027G02380 | 1 | ||
Tree-based ortholog | many-to-many | CP00027G02400 CP00027G02380 | 2 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV68465G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV68465G00010 | 1 | ||
Musa acuminata | Orthologous gene family | many-to-1 | MA01G28230 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA01G28230 | 1 | ||
Tree-based ortholog | many-to-1 | MA01G28230 | 1 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_10G09280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_10G09280 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS10G14194 | 1 | |
Tree-based ortholog | many-to-many | OS10G13914 OS10G14194 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G13040 | 1 | |
Tree-based ortholog | many-to-1 | SI002G13040 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL11G012170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G012170 | 1 | ||
Tree-based ortholog | many-to-1 | SL11G012170 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G013620 | 1 | |
Tree-based ortholog | many-to-1 | SB01G013620 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV00G12010 | 1 | |
Anchor point | 1-to-1 | VV00G12010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G12010 | 1 | ||
Tree-based ortholog | many-to-1 | VV00G12010 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G46550 | 1 | |
Tree-based ortholog | many-to-1 | ZM01G46550 | 1 |