Integrative Orthology Viewer: PT16G00600 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT06G00540 PT16G00600 | 2 | |
Anchor point | PT06G00540 PT01G36800 PT14G16840 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT16G00600 PT06G00540 | 2 | ||
Tree-based ortholog | PT16G00600 PT06G00540 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-1 | AT5G47650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G47650 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G47650 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G35490 | 1 | |
Tree-based ortholog | many-to-1 | BD1G35490 | 1 | ||
Carica papaya | Anchor point | many-to-many | CP00027G02370 CP00012G01460 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00012G01460 | 1 | ||
Tree-based ortholog | many-to-1 | CP00027G02370 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR08G02860 | 1 | |
Tree-based ortholog | many-to-1 | CR08G02860 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV162314G00010 HV249680G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV249680G00010 HV162314G00010 | 2 | ||
Tree-based ortholog | many-to-many | HV249680G00010 HV162314G00010 | 2 | ||
Musa acuminata | Orthologous gene family | many-to-1 | MA08G26480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA04G20060 | 1 | ||
Tree-based ortholog | many-to-many | MA04G20060 MA08G26480 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G38550 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_06G38550 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G42790 | 1 | |
Tree-based ortholog | many-to-1 | OS06G42790 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL14G01710 OL14G01040 | 2 | |
Tree-based ortholog | many-to-many | OL14G01710 OL14G01040 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00014G01500 PP00038G00880 | 2 | |
Tree-based ortholog | many-to-many | PP00038G00880 PP00014G01500 | 2 | ||
Setaria italica | Orthologous gene family | many-to-1 | SI004G21220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G21220 | 1 | ||
Tree-based ortholog | many-to-1 | SI004G21220 | 1 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL12G015700 SL10G005950 | 2 | |
Tree-based ortholog | many-to-1 | SL05G054230 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G024820 | 1 | |
Tree-based ortholog | many-to-1 | SB10G024820 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV12G09760 | 1 | |
Anchor point | many-to-many | VV12G09750 VV00G12020 VV19G05630 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV12G09760 VV12G09750 VV12G09770 | 3 | ||
Tree-based ortholog | many-to-1 | VV00G12030 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G13070 | 1 | |
Tree-based ortholog | many-to-many | ZM09G14850 ZM06G13070 | 2 |