Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT15G13850
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT15G13850 | 1 |  |
| Anchor point | PT12G13610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT15G13850 | 1 | ||
| Tree-based ortholog | PT15G13850 PT12G13610 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G62090 | 1 | |
| Tree-based ortholog | many-to-many | AT4G25520 AT4G25515 AT5G62090 | 3 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G49497 | 1 | |
| Tree-based ortholog | many-to-1 | BD1G49497 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00107G00100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00107G00100 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00107G00100 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV43269G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV6775G00010 HV57240G00010 HV43269G00010 | 3 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA02G03360 MA01G16890 MA10G07670 ... | 4 | |
| Tree-based ortholog | many-to-many | MA02G03360 MA01G08220 MA10G07670 ... | 5 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_06G02560 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_06G02560 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G03600 | 1 | |
| Tree-based ortholog | many-to-1 | OS06G03600 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00015G00260 PP00041G00400 PP00279G00130 | 3 | |
| Tree-based ortholog | many-to-many | PP00041G00400 PP00279G00130 PP00015G00260 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI004G01540 | 1 | |
| Tree-based ortholog | many-to-many | SI004G01540 SI002G04340 | 2 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL03G026190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G026190 | 1 | ||
| Tree-based ortholog | many-to-1 | SL03G026190 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB02G003890 | 1 | |
| Tree-based ortholog | many-to-1 | SB02G003890 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-many | VV16G00620 VV02G07220 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G00620 | 1 | ||
| Tree-based ortholog | many-to-1 | VV16G00620 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G07340 | 1 | |
| Tree-based ortholog | many-to-many | ZM09G06110 ZM06G07340 ZM07G02540 | 3 |