Integrative Orthology Viewer: PT15G07750 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT15G07750 | 1 | |
Anchor point | PT12G08170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT12G08170 PT15G07750 | 2 | ||
Tree-based ortholog | PT15G07750 PT12G08170 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G22220 | 1 | |
Tree-based ortholog | many-to-many | AT4G04080 AT3G01020 AT4G22220 | 3 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD2G45740 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G45740 | 1 | ||
Tree-based ortholog | many-to-many | BD2G16040 BD2G45740 | 2 | ||
Carica papaya | Anchor point | 1-to-1 | CP00076G00420 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00076G00420 | 1 | ||
Tree-based ortholog | many-to-1 | CP00076G00420 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR13G01710 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G01710 | 1 | ||
Tree-based ortholog | many-to-1 | CR13G01710 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1567571G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV1567571G00010 | 1 | ||
Musa acuminata | Anchor point | 1-to-1 | MA10G20910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA06G09330 | 1 | ||
Tree-based ortholog | many-to-many | MA06G22710 MA06G09330 MA10G20910 | 3 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_01G44730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G44730 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_05G43500 OSINDICA_01G44730 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G47340 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G47340 | 1 | ||
Tree-based ortholog | many-to-many | OS05G49300 OS01G47340 | 2 | ||
Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL01G03040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G03040 | 1 | ||
Tree-based ortholog | many-to-1 | OL01G03040 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00076G00770 PP00039G01610 | 2 | |
Tree-based ortholog | many-to-many | PP00039G01610 PP00076G00770 PP00507G00040 | 3 | ||
Setaria italica | Orthologous gene family | 1-to-1 | SI005G26010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G26010 | 1 | ||
Tree-based ortholog | many-to-many | SI005G26010 SI003G14220 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL03G112900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL03G112900 SL07G007450 | 2 | ||
Tree-based ortholog | many-to-many | SL03G112900 SL07G007450 | 2 | ||
Sorghum bicolor | Anchor point | 1-to-1 | SB03G030300 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G030300 | 1 | ||
Tree-based ortholog | many-to-many | SB03G030300 SB09G028890 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV01G11400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G11400 | 1 | ||
Tree-based ortholog | many-to-1 | VV01G11400 | 1 | ||
Zea mays | Orthologous gene family | 1-to-many | ZM03G35660 ZM08G25000 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM08G25000 ZM03G35660 | 2 | ||
Tree-based ortholog | many-to-many | ZM08G25000 ZM03G35660 ZM08G10300 ... | 5 |