Integrative Orthology Viewer: PT14G04330 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT14G04330 | 1 | |
Anchor point | PT02G13460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT02G13460 PT14G04330 | 2 | ||
Tree-based ortholog | PT14G04330 PT02G13460 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT3G60180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G26667 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G26667 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G20640 | 1 | |
Tree-based ortholog | many-to-1 | BD1G20640 | 1 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00041G00510 | 1 | |
Tree-based ortholog | many-to-1 | CP00041G00510 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G06500 | 1 | |
Tree-based ortholog | many-to-1 | CR10G04570 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV2548914G00010 HV8266G00010 | 2 | |
Tree-based ortholog | many-to-many | HV2548914G00010 HV8266G00010 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G12680 MA04G12030 MA03G28250 | 3 | |
Tree-based ortholog | many-to-many | MA03G28250 MA04G12030 MA04G12680 ... | 4 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G52140 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_07G35210 OSINDICA_02G52140 OSINDICA_06G09610 | 3 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G53790 | 1 | |
Tree-based ortholog | many-to-many | OS07G43170 OS02G53790 OS06G10200 | 3 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G05190 | 1 | |
Tree-based ortholog | many-to-1 | OL01G05190 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00083G00130 PP00199G00280 | 2 | |
Tree-based ortholog | many-to-many | PP00426G00110 PP00045G00370 PP00061G00640 | 3 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G35410 | 1 | |
Tree-based ortholog | many-to-many | SI006G19200 SI001G35410 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL01G088480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G088480 | 1 | ||
Tree-based ortholog | many-to-1 | SL01G088480 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G028830 | 1 | |
Tree-based ortholog | many-to-many | SB07G028830 SB04G034900 | 2 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G03870 | 1 | |
Tree-based ortholog | many-to-1 | VV15G03870 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G26610 | 1 | |
Tree-based ortholog | many-to-many | ZM05G42400 ZM04G26610 | 2 |