Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT13G13840
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT13G13840 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT13G13860 PT13G13840 PTCG00860 ... | 4 | ||
| Tree-based ortholog | PTCG00860 PT13G13840 PT13G13650 ... | 6 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATCG00830 ATCG01310 | 2 | |
| Tree-based ortholog | many-to-many | ATCG00830 ATCG01310 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-many | BDCG00820 BDCG01240 | 2 | |
| Tree-based ortholog | many-to-many | BD3G18424 BD1G05800 BDCG01240 ... | 5 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CPCG01280 CPCG00840 | 2 | |
| Tree-based ortholog | many-to-many | CPCG01280 CPCG00840 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRCG00210 | 1 | |
| Tree-based ortholog | many-to-1 | CRCG00210 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1432957G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV95035G00010 HV64501G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MACG01370 MACG00850 | 2 | |
| Tree-based ortholog | many-to-many | MACG01370 MACG00850 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OSINDICA_CG00460 OSINDICA_CG00630 | 2 | |
| Tree-based ortholog | many-to-1 | OSINDICA_03G16980 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OSCG00950 OSCG01580 | 2 | |
| Tree-based ortholog | many-to-many | OSCG00950 OSCG01580 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G04250 | 1 | |
| Tree-based ortholog | many-to-1 | OL01G04250 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPCG00940 | 1 | |
| Tree-based ortholog | many-to-1 | PPCG00940 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SICG01280 SICG00860 | 2 | |
| Tree-based ortholog | many-to-1 | SI007G16660 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL01G007630 SLCG00840 SLCG01320 | 3 | |
| Tree-based ortholog | many-to-1 | SL10G018610 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SBCG00940 SBCG01400 | 2 | |
| Tree-based ortholog | many-to-many | SBCG00940 SB00G01690 SBCG01400 | 3 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VVCG00890 | 1 | |
| Tree-based ortholog | many-to-1 | VVCG00890 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZMCG00870 ZMCG01550 | 2 | |
| Tree-based ortholog | many-to-many | ZMCG00550 ZM01G42910 ZM10G12390 ... | 11 |