Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT13G12390
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT13G12390 | 1 |  |
| Anchor point | PT19G09220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT13G12390 PT19G09220 | 2 | ||
| Tree-based ortholog | PT13G12390 PT19G09220 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G06280 | 1 | |
| Tree-based ortholog | many-to-1 | AT1G06280 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G44850 | 1 | |
| Tree-based ortholog | many-to-1 | BD2G08480 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00209G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00209G00030 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00209G00030 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV39524G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV98873G00010 | 1 | ||
| Musa acuminata | Anchor point | 1-to-1 | MA07G24310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G32930 MA02G13430 MA07G00890 | 3 | ||
| Tree-based ortholog | many-to-many | MA09G26060 MA06G30500 MA03G26530 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OSINDICA_05G24690 OSINDICA_05G24700 | 2 | |
| Tree-based ortholog | many-to-1 | OSINDICA_01G13450 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G27980 | 1 | |
| Tree-based ortholog | many-to-1 | OS01G14030 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00009G02210 PP00056G00320 PP00134G00130 ... | 8 | |
| Tree-based ortholog | many-to-many | PP00056G00320 PP00013G00380 PP00073G00040 ... | 8 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G28560 | 1 | |
| Tree-based ortholog | many-to-1 | SI005G00230 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL02G077380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL12G010810 | 1 | ||
| Tree-based ortholog | many-to-1 | SL12G010810 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB09G016240 | 1 | |
| Tree-based ortholog | many-to-1 | SB10G029595 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G21160 | 1 | |
| Tree-based ortholog | many-to-many | VV17G04370 VV14G12670 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G12080 | 1 | |
| Tree-based ortholog | many-to-1 | ZM06G10370 | 1 |