Integrative Orthology Viewer: PT12G13860 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT12G13860 PT15G14050 | 2 | |
Anchor point | PT15G14050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT12G13860 PT15G14050 | 2 | ||
Tree-based ortholog | PT15G14050 PT12G13860 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT5G52200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G52200 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G31120 | 1 | |
Tree-based ortholog | many-to-1 | BD3G48000 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV8481G00010 HV157829G00020 | 2 | |
Tree-based ortholog | many-to-1 | HV8481G00010 | 1 | ||
Musa acuminata | Orthologous gene family | many-to-1 | MA09G05880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA09G05880 MA06G26750 | 2 | ||
Tree-based ortholog | many-to-1 | MA09G05880 | 1 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_05G20950 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_02G37730 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G23610 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-many | PP00068G00480 PP00084G00200 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00068G00480 PP00084G00200 | 2 | ||
Tree-based ortholog | many-to-many | PP00068G00480 PP00084G00200 | 2 | ||
Setaria italica | Orthologous gene family | many-to-1 | SI006G09590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI006G09590 | 1 | ||
Tree-based ortholog | many-to-many | SI006G09590 SI001G23320 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G025980 | 1 | |
Anchor point | 1-to-1 | SL03G025980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G025980 | 1 | ||
Tree-based ortholog | many-to-1 | SL03G025980 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G025190 | 1 | |
Vitis vinifera | Orthologous gene family | many-to-1 | VV16G00160 | 1 | |
Anchor point | 1-to-many | VV16G00160 VV02G07060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV16G00160 | 1 | ||
Tree-based ortholog | many-to-1 | VV16G00160 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G18060 | 1 | |
Tree-based ortholog | many-to-1 | ZM10G16700 | 1 |