Integrative Orthology Viewer: PT12G13340 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT12G13340 | 1 | |
Anchor point | PT03G12150 PT01G11030 PT15G13550 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT15G13550 PT12G13340 | 2 | ||
Tree-based ortholog | PT12G13340 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-1 | AT5G62100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G52060 | 1 | ||
Tree-based ortholog | 1-to-1 | AT5G52060 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G35680 | 1 | |
Tree-based ortholog | 1-to-many | BD3G42060 BD4G35680 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00107G00050 | 1 | |
Tree-based ortholog | 1-to-1 | CP38550G00010 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV38485G00010 | 1 | |
Tree-based ortholog | 1-to-1 | HV137524G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G06060 MA03G12650 MA01G19620 ... | 6 | |
Tree-based ortholog | 1-to-many | MA03G14900 MA04G20240 MA07G06060 ... | 5 | ||
Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_08G41940 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G27930 | 1 | ||
Tree-based ortholog | 1-to-1 | OSINDICA_09G27930 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G35630 | 1 | |
Tree-based ortholog | 1-to-many | OS09G35630 OS08G43270 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00006G00810 PP00060G00670 | 2 | |
Tree-based ortholog | 1-to-many | PP00006G00810 PP00060G00670 | 2 | ||
Setaria italica | Anchor point | many-to-1 | SI004G01590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G28760 | 1 | ||
Tree-based ortholog | 1-to-1 | SI004G01590 | 1 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL08G080320 SL03G026220 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL06G035720 SL03G026220 | 2 | ||
Tree-based ortholog | 1-to-1 | SL08G080320 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G025170 | 1 | |
Tree-based ortholog | 1-to-1 | SB07G025170 | 1 | ||
Vitis vinifera | Anchor point | many-to-1 | VV16G00650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV16G00650 | 1 | ||
Tree-based ortholog | 1-to-1 | VV14G01510 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G42350 ZM02G33920 | 2 | |
Tree-based ortholog | 1-to-many | ZM09G02800 ZM00G00410 ZM02G33920 ... | 5 |