Integrative Orthology Viewer: PT12G12960 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT12G12960 | 1 | |
Anchor point | PT14G07010 PT15G13140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT15G13140 PT12G12960 | 2 | ||
Tree-based ortholog | PT06G26980 PT04G01620 PT15G13140 ... | 4 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-many | AT5G62250 AT5G51600 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G51600 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G51600 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G46800 | 1 | |
Tree-based ortholog | many-to-many | BD2G46800 BD2G17300 | 2 | ||
Carica papaya | Anchor point | many-to-1 | CP00003G02730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00003G02730 | 1 | ||
Tree-based ortholog | many-to-1 | CP00003G02730 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR14G01360 | 1 | |
Tree-based ortholog | many-to-1 | CR14G01360 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1562674G00010 | 1 | |
Tree-based ortholog | many-to-many | HV1562674G00010 HV43248G00010 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA05G11620 MA01G02550 | 2 | |
Tree-based ortholog | many-to-many | MA01G02550 MA05G11620 MA05G10260 | 3 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G46530 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_01G46530 OSINDICA_05G42150 | 2 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G49200 | 1 | |
Tree-based ortholog | many-to-many | OS01G49200 OS05G47970 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00135G00290 PP00153G00240 PP00153G00230 ... | 5 | |
Tree-based ortholog | many-to-many | PP00011G00480 PP00153G00230 PP00135G00290 ... | 6 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G28180 | 1 | |
Tree-based ortholog | many-to-1 | SI005G28180 | 1 | ||
Solanum lycopersicum | Anchor point | many-to-1 | SL03G007130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL11G072280 SL03G007130 | 2 | ||
Tree-based ortholog | many-to-many | SL03G007130 SL11G072280 | 2 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G031480 | 1 | |
Tree-based ortholog | many-to-1 | SB03G031480 | 1 | ||
Vitis vinifera | Anchor point | many-to-1 | VV16G03340 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV16G03340 | 1 | ||
Tree-based ortholog | many-to-1 | VV16G03340 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G25760 | 1 | |
Tree-based ortholog | many-to-many | ZM03G34570 ZM09G20000 ZM01G24970 ... | 5 |