Integrative Orthology Viewer: PT12G10440 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT12G10440 | 1 | |
Anchor point | PT15G10370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT15G10370 PT12G10440 | 2 | ||
Tree-based ortholog | PT12G10440 PT15G10370 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT5G50900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G50900 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G50900 | 1 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD4G18260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G31550 | 1 | ||
Tree-based ortholog | many-to-1 | BD4G18260 | 1 | ||
Carica papaya | Anchor point | 1-to-1 | CP00004G01130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00004G01130 | 1 | ||
Tree-based ortholog | many-to-1 | CP00004G01130 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV57989G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV56568G00010 | 1 | ||
Musa acuminata | Anchor point | 1-to-1 | MA10G18920 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA10G18920 MA06G11250 | 2 | ||
Tree-based ortholog | many-to-many | MA06G11250 MA10G18920 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_10G28250 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_09G03540 OSINDICA_07G29720 OSINDICA_02G06140 | 3 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS11G31590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G02580 | 1 | ||
Tree-based ortholog | many-to-1 | OS11G31590 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00030G01340 PP00150G00670 PP00021G00830 ... | 4 | |
Tree-based ortholog | many-to-many | PP00021G00830 PP00030G01340 PP00150G00670 ... | 4 | ||
Setaria italica | Anchor point | 1-to-1 | SI008G13490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G58620 | 1 | ||
Tree-based ortholog | many-to-1 | SI008G13490 | 1 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL03G097740 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G097740 | 1 | ||
Tree-based ortholog | many-to-1 | SL03G097740 | 1 | ||
Sorghum bicolor | Anchor point | 1-to-1 | SB05G018830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G049470 | 1 | ||
Tree-based ortholog | many-to-many | SB02G036330 SB10G027680 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV17G08790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV17G08790 | 1 | ||
Tree-based ortholog | many-to-1 | VV17G08790 | 1 | ||
Zea mays | Anchor point | 1-to-1 | ZM04G05390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G01100 | 1 | ||
Tree-based ortholog | many-to-many | ZM02G27050 ZM03G19480 ZM07G24230 ... | 5 |