Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT12G08910
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT12G08910 | 1 |  |
| Anchor point | PT15G08450 PT10G04770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT15G08450 PT12G08910 | 2 | ||
| Tree-based ortholog | PT12G08910 PT15G08450 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT2G04220 AT4G12690 | 2 | |
| Tree-based ortholog | many-to-many | AT3G13229 AT4G12690 AT2G04220 ... | 4 | ||
| Brachypodium distachyon | Anchor point | many-to-1 | BD2G58290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G58290 | 1 | ||
| Tree-based ortholog | many-to-1 | BD2G58290 | 1 | ||
| Carica papaya | Anchor point | many-to-1 | CP00033G00400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00033G00400 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00033G00400 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV40932G00020 | 1 | |
| Tree-based ortholog | many-to-1 | HV40932G00020 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA10G17160 | 1 | |
| Tree-based ortholog | many-to-1 | MA00G00700 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_01G64690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G64690 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_01G64690 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS01G68140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G68140 | 1 | ||
| Tree-based ortholog | many-to-1 | OS01G68140 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00128G00640 PP00148G00130 | 2 | |
| Tree-based ortholog | many-to-many | PP00128G00640 PP00148G00130 | 2 | ||
| Setaria italica | Anchor point | many-to-1 | SI005G43360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G43360 | 1 | ||
| Tree-based ortholog | many-to-1 | SI005G43360 | 1 | ||
| Solanum lycopersicum | Anchor point | many-to-1 | SL03G112130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G112130 | 1 | ||
| Tree-based ortholog | many-to-1 | SL03G112130 | 1 | ||
| Sorghum bicolor | Anchor point | many-to-1 | SB03G043380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G043380 | 1 | ||
| Tree-based ortholog | many-to-1 | SB03G043380 | 1 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV01G00090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV17G00850 | 1 | ||
| Tree-based ortholog | many-to-1 | VV17G00850 | 1 | ||
| Zea mays | Anchor point | many-to-1 | ZM03G23440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G23440 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM03G23440 | 1 |