Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT12G05830
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | PT15G05300 PT12G05830 | 2 |  |
| Tree-based ortholog | PT15G05300 PT12G05830 | 2 | ||
| Orthologous gene family | PT12G05830 | 1 | ||
| Anchor point | PT08G11450 PT10G13160 PT15G05300 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G23100 | 1 | |
| Tree-based ortholog | many-to-1 | AT5G23100 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G44957 | 1 | |
| Tree-based ortholog | many-to-many | BD2G15590 BD2G44957 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00013G00650 | 1 | |
| Tree-based ortholog | many-to-1 | CP00013G00650 | 1 | ||
| Anchor point | many-to-1 | CP00013G00650 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV244115G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV156582G00010 HV244115G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA01G26180 MA08G03950 MA04G00690 ... | 4 | |
| Tree-based ortholog | many-to-many | MA02G23450 MA03G21400 MA04G00690 ... | 6 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_05G44420 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_05G44420 OSINDICA_01G43130 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G50160 | 1 | |
| Tree-based ortholog | many-to-many | OS05G50160 OS01G45510 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00324G00040 PP00003G01550 PP00020G00480 | 3 | |
| Tree-based ortholog | many-to-many | PP00020G00480 PP00324G00040 PP00003G01550 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G24840 | 1 | |
| Tree-based ortholog | many-to-many | SI003G13550 SI005G24840 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL03G114390 SL06G069300 | 2 | |
| Tree-based ortholog | many-to-many | SL03G114390 SL06G069300 | 2 | ||
| Anchor point | many-to-many | SL05G010010 SL03G114390 SL06G069300 | 3 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G029300 | 1 | |
| Tree-based ortholog | many-to-many | SB09G029410 SB03G029300 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV17G05420 | 1 | |
| Tree-based ortholog | many-to-1 | VV17G05420 | 1 | ||
| Anchor point | many-to-1 | VV17G05420 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G36530 | 1 | |
| Tree-based ortholog | many-to-many | ZM06G31910 ZM08G24610 ZM03G36530 ... | 4 |