Integrative Orthology Viewer: PT12G04730 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT12G04730 | 1 | |
Anchor point | PT15G03900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT12G04740 PT15G03900 PT12G04730 | 3 | ||
Tree-based ortholog | PT12G04730 PT15G03900 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-many | AT1G48600 AT1G73600 AT3G18000 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G48600 AT3G18000 | 2 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G47290 | 1 | |
Tree-based ortholog | many-to-1 | BD2G17680 | 1 | ||
Carica papaya | Anchor point | 1-to-1 | CP00003G03960 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00003G03960 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1573172G00010 | 1 | |
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA01G13140 MA00G00130 | 2 | |
Tree-based ortholog | many-to-1 | MA00G00130 | 1 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_05G41770 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_05G41770 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS01G50030 OS01G50032 | 2 | |
Tree-based ortholog | many-to-many | OS01G50030 OS05G47545 OS05G47540 | 3 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00060G00940 | 1 | |
Tree-based ortholog | many-to-1 | PP00060G00940 | 1 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G28920 | 1 | |
Tree-based ortholog | many-to-many | SI005G28910 SI005G28920 SI003G16180 | 3 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL06G068950 SL03G118750 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL12G040790 SL03G118750 | 2 | ||
Tree-based ortholog | many-to-1 | SL03G118750 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G031950 | 1 | |
Tree-based ortholog | many-to-many | SB03G031940 SB03G031950 SB04G032625 ... | 4 | ||
Vitis vinifera | Anchor point | 1-to-many | VV17G07140 VV01G06350 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV17G07140 | 1 | ||
Tree-based ortholog | many-to-1 | VV17G07140 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G26020 | 1 | |
Tree-based ortholog | many-to-many | ZM03G34130 ZM06G30170 | 2 |