Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT12G00450
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT12G00450 | 1 |  |
| Anchor point | PT15G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT15G00050 PT12G00450 | 2 | ||
| Tree-based ortholog | PT12G00450 PT15G00050 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT5G24655 AT3G49570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT5G24655 AT5G24660 AT3G49570 ... | 4 | ||
| Tree-based ortholog | many-to-many | AT5G24660 AT5G24655 AT3G49570 ... | 4 | ||
| Brachypodium distachyon | Tree-based ortholog | many-to-1 | BD3G30730 | 1 | |
| Carica papaya | Anchor point | 1-to-1 | CP00003G01920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00003G01920 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00003G01920 | 1 | ||
| Oryza sativa ssp. indica | Tree-based ortholog | many-to-1 | OSINDICA_10G27220 | 1 | |
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS10G36610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS10G36610 | 1 | ||
| Tree-based ortholog | many-to-many | OS10G36580 OS10G36610 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G096780 | 1 | |
| Anchor point | 1-to-1 | SL06G072990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL06G072990 SL03G096760 SL03G096780 ... | 4 | ||
| Tree-based ortholog | many-to-many | SL03G096770 SL06G072990 SL03G096780 ... | 4 | ||
| Sorghum bicolor | Tree-based ortholog | many-to-1 | SB01G017440 | 1 | |
| Zea mays | Orthologous gene family | 1-to-1 | ZM05G09070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G09070 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM05G09070 | 1 |