Integrative Orthology Viewer: PT11G07110 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G20620 PT05G20050 PT05G20070 ... | 12 | |
Anchor point | PT02G02100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT11G07110 PT05G20060 PT05G20050 | 3 | ||
Tree-based ortholog | PT05G20060 PT05G20050 PT11G07110 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G29130 AT2G30210 AT5G01050 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G09360 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G48100 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G65100 BD2G53800 BD2G54690 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BD3G59187 BD3G59210 | 2 | ||
Tree-based ortholog | many-to-many | BD3G59180 BD3G59187 BD3G59210 | 3 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00056G00660 CP00081G01180 CP00085G00780 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00026G03080 | 1 | ||
Tree-based ortholog | many-to-many | CP00139G00140 CP00139G00150 CP00336G00020 ... | 16 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G06860 | 1 | |
Tree-based ortholog | many-to-many | CR01G06860 CR03G04690 | 2 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV1570130G00010 HV160336G00010 HV37404G00010 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV2546857G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV2546857G00010 HV37404G00010 | 2 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA00G14000 MA03G10130 MA03G15640 ... | 12 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA03G22000 | 1 | ||
Tree-based ortholog | many-to-1 | MA03G22000 | 1 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_00G30700 OSINDICA_01G57800 OSINDICA_01G59150 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G59220 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_02G49710 OSINDICA_01G26560 OSINDICA_10G20640 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G27700 OS01G62480 OS01G62600 ... | 12 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G51440 | 1 | ||
Tree-based ortholog | many-to-many | OS02G51440 OS01G27700 OS10G30140 ... | 4 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00206G00320 | 1 | |
Tree-based ortholog | many-to-many | PP00077G00890 PP00206G00320 | 2 | ||
Setaria italica | Orthologous gene family | many-to-many | SI001G22790 SI003G08520 SI003G22090 ... | 13 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G22790 | 1 | ||
Tree-based ortholog | many-to-many | SI001G33370 SI001G33360 SI001G22790 ... | 4 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G072280 SL06G048860 SL06G082240 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL04G072280 | 1 | ||
Tree-based ortholog | many-to-1 | SL04G072280 | 1 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB01G039690 SB03G039520 SB04G027850 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G027860 | 1 | ||
Tree-based ortholog | many-to-many | SB04G027850 SB04G034610 SB04G034620 ... | 7 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G22350 VV00G22380 VV06G00980 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV18G16370 VV00G22050 VV18G16290 ... | 6 | ||
Tree-based ortholog | many-to-many | VV18G11820 VV18G16370 VV00G22050 ... | 10 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G11210 ZM01G48750 ZM03G26820 ... | 13 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G40560 | 1 | ||
Tree-based ortholog | many-to-many | ZM05G40560 ZM04G27780 | 2 |