Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT10G25400
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT10G25400 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT10G25400 | 1 | ||
| Tree-based ortholog | PT13G06780 PT05G04350 PT13G06550 ... | 4 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G07610 | 1 | |
| Tree-based ortholog | many-to-1 | AT5G07610 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BD2G15400 BD3G44270 BD3G44280 | 3 | |
| Tree-based ortholog | many-to-many | BD1G04677 BD5G03030 BD5G03050 ... | 30 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00013G02510 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV1803388G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV2552147G00010 HV1564310G00010 HV273753G00010 ... | 24 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA08G06520 | 1 | |
| Tree-based ortholog | many-to-1 | MA05G01390 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | 1-to-1 | OSINDICA_02G40170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_02G40150 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_01G27090 OSINDICA_01G27250 OSINDICA_05G07150 ... | 22 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G41910 | 1 | |
| Tree-based ortholog | many-to-many | OS01G28150 OS01G28300 OS05G08440 ... | 19 | ||
| Setaria italica | Orthologous gene family | 1-to-1 | SI008G08230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI008G08230 | 1 | ||
| Tree-based ortholog | many-to-many | SI009G36610 SI003G17270 SI003G36640 ... | 49 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G071270 | 1 | |
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G016790 | 1 | |
| Tree-based ortholog | many-to-many | SB01G031630 SB08G015610 SB02G002810 ... | 38 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV11G00850 VV09G08170 | 2 | |
| Tree-based ortholog | many-to-1 | VV04G04720 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G46170 ZM02G45260 ZM02G46140 ... | 4 | |
| Tree-based ortholog | many-to-many | ZM07G03430 ZM07G03410 ZM07G03390 ... | 18 |