Integrative Orthology Viewer: PT10G23770 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT10G23770 | 1 | |
Anchor point | PT08G02100 PT04G20370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT08G02100 PT08G02120 PT10G23780 ... | 5 | ||
Tree-based ortholog | PT10G23770 PT08G02140 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-1 | AT2G36290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT2G36290 AT1G74300 | 2 | ||
Tree-based ortholog | many-to-1 | AT3G54240 | 1 | ||
Brachypodium distachyon | Anchor point | many-to-many | BD5G09290 BD4G42337 BD3G44867 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G44867 | 1 | ||
Tree-based ortholog | many-to-many | BD5G09290 BD3G44867 | 2 | ||
Carica papaya | Anchor point | many-to-many | CP00183G00110 CP00005G00310 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00005G00310 | 1 | ||
Tree-based ortholog | many-to-1 | CP00183G00120 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1565252G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV1565252G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA11G12760 | 1 | |
Tree-based ortholog | many-to-1 | MA11G12760 | 1 | ||
Oryza sativa ssp. indica | Anchor point | many-to-many | OSINDICA_01G60580 OSINDICA_12G04400 OSINDICA_04G25720 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G31540 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_04G25730 OSINDICA_04G25720 OSINDICA_04G25740 ... | 4 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-many | OS04G33590 OS02G32970 OS12G05600 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G32970 | 1 | ||
Tree-based ortholog | many-to-many | OS04G33600 OS04G33590 OS02G32970 | 3 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00405G00010 | 1 | |
Tree-based ortholog | many-to-many | PP00033G00490 PP00266G00220 PP00139G00180 ... | 5 | ||
Setaria italica | Anchor point | many-to-many | SI001G19080 SI008G03300 SI007G09420 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G19080 | 1 | ||
Tree-based ortholog | many-to-many | SI001G19080 SI007G09420 SI007G09430 | 3 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL09G009500 SL05G055290 SL11G007030 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL09G009540 SL09G009510 SL09G009550 ... | 4 | ||
Tree-based ortholog | many-to-many | SL09G009500 SL09G009520 SL09G009510 ... | 6 | ||
Sorghum bicolor | Anchor point | many-to-many | SB04G021660 SB08G003220 SB05G003210 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G021660 | 1 | ||
Tree-based ortholog | many-to-many | SB04G021660 SB06G015540 SB06G015550 ... | 4 | ||
Vitis vinifera | Anchor point | many-to-many | VV13G02280 VV08G11880 VV06G10220 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G11880 | 1 | ||
Tree-based ortholog | many-to-1 | VV13G02280 | 1 | ||
Zea mays | Anchor point | many-to-1 | ZM05G29770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G29770 | 1 | ||
Tree-based ortholog | many-to-many | ZM05G29770 ZM02G16130 ZM02G16100 | 3 |