Integrative Orthology Viewer: PT10G22720 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT10G22720 | 1 | |
Anchor point | PT08G03520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT08G03520 PT10G22720 | 2 | ||
Tree-based ortholog | PT10G22720 PT08G03520 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT3G10390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G10390 | 1 | ||
Tree-based ortholog | many-to-many | AT4G16310 AT4G29720 AT1G65840 ... | 7 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD3G27750 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G18210 | 1 | ||
Tree-based ortholog | many-to-many | BD3G27750 BD2G47960 BD5G25730 ... | 7 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP37043G00010 | 1 | |
Tree-based ortholog | many-to-many | CP00061G00450 CP00904G00040 CP45831G00010 ... | 7 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G01440 | 1 | |
Tree-based ortholog | many-to-many | CR07G01440 CR09G04140 CR10G06530 | 3 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV49556G00020 | 1 | |
Tree-based ortholog | many-to-many | HV1558606G00010 HV63098G00010 HV2548179G00010 ... | 6 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA04G26000 | 1 | |
Tree-based ortholog | many-to-many | MA02G10070 MA04G16370 MA03G33190 ... | 10 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_04G39490 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_10G29070 OSINDICA_01G48420 OSINDICA_02G41670 ... | 8 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G47270 | 1 | |
Tree-based ortholog | many-to-many | OS10G38850 OS01G51320 OS04G57550 ... | 8 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL19G00670 | 1 | |
Tree-based ortholog | many-to-many | OL03G03600 OL03G03590 OL07G00030 ... | 5 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00048G00430 PP00145G00370 | 2 | |
Tree-based ortholog | many-to-many | PP00145G00370 PP00048G00430 PP00200G00370 ... | 8 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI007G20340 | 1 | |
Tree-based ortholog | many-to-many | SI009G35600 SI005G29820 SI003G02110 ... | 8 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL11G008320 SL05G055580 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G008320 | 1 | ||
Tree-based ortholog | many-to-many | SL02G033080 SL05G055580 SL05G055590 ... | 31 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G025190 | 1 | |
Tree-based ortholog | many-to-many | SB01G030750 SB03G032650 SB06G032460 ... | 7 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV13G02740 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G02740 | 1 | ||
Tree-based ortholog | many-to-many | VV11G03570 VV04G03850 VV12G03660 ... | 7 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G07210 | 1 | |
Tree-based ortholog | many-to-many | ZM01G19770 ZM06G09460 ZM03G33520 ... | 10 |