Integrative Orthology Viewer: PT10G21400 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT05G11530 PT07G01330 PT07G01350 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | PT06G16810 PT07G01330 PT18G09300 ... | 9 | ||
Tree-based ortholog | PT10G21400 PT05G11560 PT07G01350 ... | 10 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G46320 AT5G59690 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G07660 AT1G07820 AT3G45930 ... | 8 | ||
Tree-based ortholog | many-to-many | AT2G28740 AT3G46320 AT1G07820 ... | 8 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G05980 BD1G06000 BD1G68190 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BD2G23010 BD4G30960 BD1G77230 ... | 13 | ||
Tree-based ortholog | many-to-many | BD4G37340 BD5G19360 BD2G23010 ... | 13 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00178G00260 CP01420G00030 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00139G00030 CP00178G00260 CP01420G00030 ... | 6 | ||
Tree-based ortholog | many-to-many | CP00139G00030 CP00001G03700 CP01420G00030 ... | 6 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR06G03650 CR06G03770 CR06G04350 ... | 15 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR17G03500 CR06G03820 CR06G06020 ... | 31 | ||
Tree-based ortholog | many-to-many | CR06G03740 CR06G05700 CR16G01810 ... | 32 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV121705G00010 HV130402G00020 HV1445345G00010 ... | 11 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV43963G00030 | 1 | ||
Tree-based ortholog | many-to-many | HV59001G00010 HV1625726G00010 HV1445345G00010 ... | 17 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA01G07430 MA01G15630 MA03G05130 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA11G25300 | 1 | ||
Tree-based ortholog | many-to-many | MA01G07430 MA09G04240 MA11G07530 ... | 11 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_01G58610 OSINDICA_04G41550 OSINDICA_05G34970 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OSINDICA_09G30340 OSINDICA_05G34560 OSINDICA_02G44330 ... | 10 | ||
Tree-based ortholog | many-to-many | OSINDICA_09G20440 OSINDICA_05G34970 OSINDICA_04G41550 ... | 10 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G61920 OS02G45940 OS07G36500 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS01G61920 OS10G39410 OS04G49420 ... | 10 | ||
Tree-based ortholog | many-to-many | OS09G26340 OS03G02780 OS10G39410 ... | 10 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL01G06460 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL11G02220 OL01G06460 | 2 | ||
Tree-based ortholog | many-to-many | OL01G06460 OL11G02220 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00002G01130 PP00083G01440 PP00100G00900 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00133G00620 | 1 | ||
Tree-based ortholog | many-to-many | PP00197G00020 PP00378G00170 PP00002G01130 ... | 10 | ||
Setaria italica | Orthologous gene family | many-to-many | SI002G22030 SI003G21520 SI005G38080 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G35170 | 1 | ||
Tree-based ortholog | many-to-many | SI006G12650 SI005G38080 SI009G35170 ... | 9 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G011390 SL06G075850 SL06G075930 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G066160 | 1 | ||
Tree-based ortholog | many-to-1 | SL11G066160 | 1 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB01G049250 SB02G032240 SB06G026490 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SB04G031620 SB02G025440 SB02G032240 ... | 11 | ||
Tree-based ortholog | many-to-many | SB09G022920 SB01G049250 SB03G004890 ... | 11 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G05520 | 1 | |
Tree-based ortholog | many-to-many | VV13G05540 VV13G05520 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G04160 ZM07G21320 ZM08G04020 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G04020 | 1 | ||
Tree-based ortholog | many-to-many | ZM02G06300 ZM07G21320 ZM08G17900 ... | 15 |