Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT10G13140
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT08G11490 PT10G13140 | 2 |  |
| Anchor point | PT08G11490 PT17G11150 PT04G10400 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT08G11490 PT10G13140 | 2 | ||
| Tree-based ortholog | PT10G13140 PT08G11490 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | many-to-1 | AT1G26110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G26110 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G00980 | 1 | |
| Tree-based ortholog | many-to-1 | BD2G00980 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00001G02260 | 1 | |
| Anchor point | many-to-many | CP00001G02260 CP00013G00570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00001G02260 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00001G02260 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR08G05460 | 1 | |
| Tree-based ortholog | many-to-1 | CR08G05460 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV42715G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV42715G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-1 | MA01G21530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA01G21530 MA02G07190 MA09G00780 | 3 | ||
| Tree-based ortholog | many-to-1 | MA01G21530 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_06G26680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G26680 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_06G26680 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS06G30060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G02090 | 1 | ||
| Tree-based ortholog | many-to-1 | OS06G30060 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL16G01090 | 1 | |
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00035G01110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00198G00280 PP00035G01050 PP00035G01110 | 3 | ||
| Tree-based ortholog | many-to-many | PP00198G00280 PP00035G01110 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI005G07740 | 1 | |
| Anchor point | many-to-1 | SI004G14450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G14450 | 1 | ||
| Tree-based ortholog | many-to-1 | SI005G07740 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G009980 | 1 | |
| Anchor point | many-to-many | SL06G069280 SL05G009980 SL03G119850 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G009980 | 1 | ||
| Tree-based ortholog | many-to-1 | SL05G009980 | 1 | ||
| Sorghum bicolor | Anchor point | many-to-1 | SB10G013950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G013950 | 1 | ||
| Tree-based ortholog | many-to-1 | SB03G008320 | 1 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV01G08370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G08370 | 1 | ||
| Tree-based ortholog | many-to-1 | VV02G09300 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM08G02110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G18400 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM08G02110 | 1 |