Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT10G10470
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT10G10470 | 1 |  |
| Anchor point | PT08G13620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT08G13620 PT08G13630 PT10G10480 ... | 5 | ||
| Tree-based ortholog | PT10G10470 PT08G13630 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G68040 | 1 | |
| Tree-based ortholog | many-to-1 | AT1G68040 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G47550 | 1 | |
| Tree-based ortholog | many-to-many | BD1G44620 BD4G08320 BD1G42760 ... | 12 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00002G01650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00002G01650 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00002G01650 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV137719G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV135927G00010 HV1559702G00010 HV134705G00010 ... | 8 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA03G03690 | 1 | |
| Tree-based ortholog | many-to-many | MA03G01170 MA11G14010 MA07G20890 ... | 18 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_04G49220 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_00G17430 OSINDICA_06G13040 OSINDICA_06G12840 ... | 25 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G57080 | 1 | |
| Tree-based ortholog | many-to-many | OS05G01140 OS06G13560 OS06G13550 ... | 29 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00072G01110 | 1 | |
| Tree-based ortholog | many-to-many | PP00204G00160 PP00327G00170 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G29220 | 1 | |
| Tree-based ortholog | many-to-many | SI003G11550 SI004G10790 SI004G10800 ... | 16 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL01G005230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL00G029190 SL01G005360 SL01G005230 ... | 4 | ||
| Tree-based ortholog | many-to-many | SL01G005230 SL01G005350 SL01G005360 ... | 6 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G032230 | 1 | |
| Tree-based ortholog | many-to-many | SB09G000290 SB03G008780 SB03G008800 ... | 19 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV01G05750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV01G05710 VV01G05730 VV01G05750 ... | 5 | ||
| Tree-based ortholog | many-to-many | VV01G05750 VV10G03940 VV01G05720 ... | 7 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G05880 | 1 | |
| Tree-based ortholog | many-to-many | ZM06G05880 ZM09G00370 ZM09G00380 ... | 15 |