Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT10G09600
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT10G09600 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT10G09600 | 1 | ||
| Tree-based ortholog | PT10G09600 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G24020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G24020 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT1G24020 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD5G12740 | 1 | |
| Tree-based ortholog | 1-to-1 | BD5G12740 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00258G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00258G00040 | 1 | ||
| Hordeum vulgare | Orthologous gene family | 1-to-1 | HV100444G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV100444G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | HV100444G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | 1-to-1 | MA03G10600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA03G10600 | 1 | ||
| Tree-based ortholog | 1-to-many | MA03G10600 MA09G18780 | 2 | ||
| Oryza sativa ssp. indica | Orthologous gene family | 1-to-1 | OSINDICA_04G31120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_04G31120 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_04G31120 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS04G39150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G39150 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS04G39150 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00022G01810 PP00051G01760 PP00037G00900 ... | 8 | |
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI007G13410 | 1 | |
| Tree-based ortholog | 1-to-1 | SI007G13410 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL05G046140 SL05G046150 SL04G007830 ... | 5 | |
| Tree-based ortholog | 1-to-many | SL09G014530 SL09G014540 SL09G014560 ... | 30 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB06G019320 | 1 | |
| Tree-based ortholog | 1-to-1 | SB06G019320 | 1 | ||
| Vitis vinifera | Anchor point | N/A | VV01G13550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G13550 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV01G13550 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G12910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G12910 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM02G12910 | 1 |