Integrative Orthology Viewer: PT10G08950 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT05G03270 PT05G03280 PT08G15150 ... | 4 | |
Anchor point | PT08G15150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT10G08950 PT08G15150 | 2 | ||
Tree-based ortholog | PT10G08950 PT08G15150 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G55020 AT1G67560 | 2 | |
Anchor point | 1-to-1 | AT3G22400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G22400 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G22400 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G09260 BD1G11670 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G11680 | 1 | ||
Tree-based ortholog | many-to-many | BD1G09260 BD1G09270 BD1G11680 ... | 4 | ||
Carica papaya | Anchor point | 1-to-1 | CP00058G01170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00058G01170 CP00058G01180 | 2 | ||
Tree-based ortholog | many-to-many | CP00058G01170 CP00058G01180 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G02920 | 1 | |
Tree-based ortholog | many-to-1 | CR12G02920 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV42927G00010 HV56948G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV39591G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV49832G00010 HV2548257G00010 HV42927G00010 ... | 6 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA00G20410 MA01G23830 MA02G05980 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA01G23830 | 1 | ||
Tree-based ortholog | many-to-many | MA01G23830 MA01G25330 MA00G20430 ... | 9 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_03G50910 OSINDICA_08G38150 OSINDICA_12G25270 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G47690 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_02G18660 OSINDICA_06G03330 OSINDICA_11G27300 ... | 8 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G49380 OS03G52860 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G49380 | 1 | ||
Tree-based ortholog | many-to-many | OS02G19790 OS06G04420 OS11G36719 ... | 7 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL07G01910 | 1 | |
Tree-based ortholog | many-to-1 | OL07G01910 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00171G00680 PP00419G00050 PP00419G00010 ... | 10 | |
Tree-based ortholog | many-to-1 | PP00312G00300 | 1 | ||
Setaria italica | Orthologous gene family | many-to-many | SI005G42190 SI009G12810 SI009G12830 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G12830 | 1 | ||
Tree-based ortholog | many-to-many | SI005G42190 SI005G42180 SI009G12830 ... | 6 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G009680 SL01G099190 | 2 | |
Anchor point | 1-to-many | SL09G075860 SL01G099150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G075860 | 1 | ||
Tree-based ortholog | many-to-many | SL09G075860 SL09G075870 | 2 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB01G011050 SB03G042440 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G011050 | 1 | ||
Tree-based ortholog | many-to-many | SB03G042450 SB03G042440 SB01G011050 ... | 4 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV13G07300 | 1 | |
Anchor point | 1-to-many | VV14G00710 VV05G04640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G00720 | 1 | ||
Tree-based ortholog | many-to-many | VV14G00710 VV06G06550 VV14G00720 | 3 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G49720 ZM05G05990 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G49720 | 1 | ||
Tree-based ortholog | many-to-many | ZM03G24390 ZM01G49720 ZM01G49730 ... | 4 |