Integrative Orthology Viewer: PT10G02180 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G21460 PT08G21480 PT10G02180 | 3 | |
Anchor point | PT08G21450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT18G04940 PT10G02180 PT08G21480 ... | 4 | ||
Tree-based ortholog | PT18G04940 PT08G21480 PT08G21460 ... | 4 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT5G18600 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G18600 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G18600 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G05660 | 1 | |
Tree-based ortholog | many-to-many | BD2G12960 BD2G60130 BD4G05650 ... | 9 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP31216G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP31216G00010 | 1 | ||
Tree-based ortholog | many-to-1 | CP31216G00010 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G05090 | 1 | |
Tree-based ortholog | many-to-1 | CR13G05090 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV39598G00010 | 1 | |
Tree-based ortholog | many-to-many | HV1621692G00010 HV1558571G00010 HV42999G00010 ... | 8 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G05870 MA05G00380 MA08G10320 | 3 | |
Tree-based ortholog | many-to-many | MA11G05870 MA08G10320 MA08G34490 ... | 10 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_05G04630 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_12G23650 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_01G25820 OSINDICA_05G04630 OSINDICA_01G67340 ... | 8 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS05G05730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G35330 | 1 | ||
Tree-based ortholog | many-to-many | OS01G27140 OS05G05730 OS01G70990 ... | 9 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00063G00030 PP00125G00550 | 2 | |
Tree-based ortholog | many-to-many | PP00063G00030 PP00125G00550 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G16930 | 1 | |
Tree-based ortholog | many-to-many | SI005G16900 SI005G16930 SI005G45640 ... | 11 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL01G067440 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G067460 | 1 | ||
Tree-based ortholog | many-to-many | SL09G074590 SL09G074600 SL05G051720 ... | 16 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G014800 | 1 | |
Tree-based ortholog | many-to-many | SB03G014800 SB03G014790 SB03G045210 ... | 13 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV05G03350 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G03350 | 1 | ||
Tree-based ortholog | many-to-1 | VV05G03350 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G12430 | 1 | |
Tree-based ortholog | many-to-many | ZM03G12430 ZM03G12420 ZM01G03780 ... | 10 |