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Integrative Orthology Viewer:
PT09G12890
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT04G16740 PT09G12890 | 2 |  |
| Anchor point | PT04G16740 PT02G02230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT04G16740 PT09G12890 | 2 | ||
| Tree-based ortholog | PT09G12890 PT04G16740 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G21190 | 1 | |
| Anchor point | many-to-many | AT4G38790 AT2G21190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT4G38790 AT2G21190 | 2 | ||
| Tree-based ortholog | many-to-many | AT4G38790 AT2G21190 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G36280 | 1 | |
| Tree-based ortholog | many-to-many | BD4G36280 BD3G42420 | 2 | ||
| Carica papaya | Anchor point | many-to-1 | CP00037G01940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00026G00420 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00037G01940 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G00170 | 1 | |
| Tree-based ortholog | many-to-1 | CR13G00170 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1564161G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV1564161G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA01G07960 MA02G03490 MA00G07680 | 3 | |
| Tree-based ortholog | many-to-many | MA01G16740 MA01G16750 MA01G17050 ... | 7 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_09G28660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_08G42150 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_08G42150 OSINDICA_09G28660 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS09G36370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G43470 | 1 | ||
| Tree-based ortholog | many-to-many | OS08G43470 OS09G36370 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL05G00400 | 1 | |
| Tree-based ortholog | many-to-1 | OL05G00400 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00442G00110 PP00280G00260 PP00195G00300 | 3 | |
| Tree-based ortholog | many-to-many | PP00442G00110 PP00195G00300 PP00280G00260 | 3 | ||
| Setaria italica | Anchor point | many-to-1 | SI002G29420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G29420 | 1 | ||
| Tree-based ortholog | many-to-many | SI002G29420 SI006G23980 | 2 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL01G111090 SL10G054850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G111090 | 1 | ||
| Tree-based ortholog | many-to-many | SL01G111090 SL10G054850 | 2 | ||
| Sorghum bicolor | Anchor point | many-to-1 | SB02G031010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G024960 | 1 | ||
| Tree-based ortholog | many-to-many | SB02G031010 SB07G024960 | 2 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV03G05380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G10560 | 1 | ||
| Tree-based ortholog | many-to-1 | VV03G05380 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G37030 | 1 | |
| Tree-based ortholog | many-to-many | ZM07G20500 ZM02G34160 ZM04G34990 ... | 4 |