Integrative Orthology Viewer: PT09G03950 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT02G01180 PT09G03950 PT09G14280 ... | 4 | |
Anchor point | PT06G09390 PT16G10580 PT01G24640 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT01G24640 PT09G03950 | 2 | ||
Tree-based ortholog | PT01G24640 PT09G03950 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G63500 AT4G35230 AT5G59010 | 3 | |
Anchor point | many-to-many | AT5G01060 AT5G59010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G59010 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G59010 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BD3G33950 BD5G26700 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G26700 | 1 | ||
Tree-based ortholog | many-to-1 | BD1G03420 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00026G02150 | 1 | |
Anchor point | many-to-many | CP00112G00920 CP00056G00610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00112G00920 | 1 | ||
Tree-based ortholog | many-to-1 | CP00112G00920 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV135279G00010 HV2546758G00010 HV39024G00010 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV135279G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV158775G00010 HV44319G00020 | 2 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA01G02190 MA01G15860 MA08G02470 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA10G00650 MA08G02470 | 2 | ||
Tree-based ortholog | many-to-many | MA08G02470 MA10G00650 | 2 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_03G02950 OSINDICA_04G50940 OSINDICA_10G29970 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G02950 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_03G58180 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G61010 OS04G58750 OS10G39670 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G61010 | 1 | ||
Tree-based ortholog | many-to-1 | OS03G61010 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00027G01570 PP00109G00460 PP00156G00740 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00122G00310 PP00328G00200 PP00156G00740 ... | 5 | ||
Tree-based ortholog | many-to-many | PP00109G00460 PP00012G01100 PP00328G00200 ... | 8 | ||
Setaria italica | Orthologous gene family | many-to-many | SI009G02840 SI009G56850 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G00950 | 1 | ||
Tree-based ortholog | many-to-1 | SI009G02840 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G080880 SL11G064890 SL12G099830 | 3 | |
Anchor point | many-to-many | SL10G085000 SL09G011750 SL06G076600 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G011750 | 1 | ||
Tree-based ortholog | many-to-1 | SL06G076600 | 1 | ||
Sorghum bicolor | Orthologous gene family | many-to-1 | SB06G033460 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G033460 | 1 | ||
Tree-based ortholog | many-to-many | SB01G002850 SB09G018835 | 2 | ||
Vitis vinifera | Anchor point | many-to-many | VV06G02540 VV08G13600 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV08G13600 VV06G02540 | 2 | ||
Tree-based ortholog | many-to-1 | VV06G02540 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G22020 ZM05G01260 ZM09G17560 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G58250 | 1 | ||
Tree-based ortholog | many-to-many | ZM05G01260 ZM01G58250 | 2 |