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Integrative Orthology Viewer:
PT09G03940
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT09G03940 | 1 |  |
| Anchor point | PT01G24630 PT06G09380 PT16G10570 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT09G03940 PT01G24630 | 2 | ||
| Tree-based ortholog | PT01G24630 PT09G03940 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | many-to-many | AT2G37940 AT2G29525 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G29525 | 1 | ||
| Tree-based ortholog | many-to-1 | AT2G29525 | 1 | ||
| Brachypodium distachyon | Anchor point | many-to-many | BD2G55020 BD2G23597 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G55020 | 1 | ||
| Tree-based ortholog | many-to-many | BD2G23597 BD2G55020 | 2 | ||
| Carica papaya | Anchor point | many-to-many | CP00112G00930 CP00056G00600 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00056G00600 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00112G00930 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR06G00230 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV245587G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV49781G00020 HV245587G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA06G24280 MA10G14100 MA03G18060 ... | 4 | |
| Tree-based ortholog | many-to-many | MA03G18060 MA06G24280 MA00G23710 ... | 4 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-many | OSINDICA_01G59760 OSINDICA_05G33600 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_00G12340 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_05G33600 OSINDICA_01G59760 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-many | OS01G63060 OS05G37910 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G21180 | 1 | ||
| Tree-based ortholog | many-to-many | OS05G37910 OS01G63060 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00122G00070 PP00192G00350 PP00210G00410 | 3 | |
| Tree-based ortholog | many-to-many | PP00122G00070 PP00192G00350 PP00210G00410 | 3 | ||
| Setaria italica | Anchor point | many-to-many | SI003G22540 SI005G39130 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G39130 | 1 | ||
| Tree-based ortholog | many-to-many | SI003G22540 SI005G39130 | 2 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL09G011740 SL10G084990 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL09G011740 SL10G086690 SL10G084990 | 3 | ||
| Tree-based ortholog | many-to-many | SL10G086690 SL10G084990 SL09G011740 | 3 | ||
| Sorghum bicolor | Anchor point | many-to-1 | SB03G039930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB09G022190 | 1 | ||
| Tree-based ortholog | many-to-many | SB09G022190 SB03G039930 | 2 | ||
| Vitis vinifera | Anchor point | many-to-many | VV06G02550 VV08G13610 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G13610 | 1 | ||
| Tree-based ortholog | many-to-1 | VV06G02550 | 1 | ||
| Zea mays | Anchor point | many-to-many | ZM03G26860 ZM08G31790 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM03G17350 ZM01G26190 | 2 | ||
| Tree-based ortholog | many-to-many | ZM06G25480 ZM08G31790 ZM03G26860 | 3 |