Integrative Orthology Viewer: PT08G22550 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G22190 PT08G22550 | 2 | |
Anchor point | PT08G22170 PT10G01420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT08G22550 PT08G22170 PT08G22580 | 3 | ||
Tree-based ortholog | PT08G22580 PT08G22550 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G15830 | 1 | |
Tree-based ortholog | many-to-1 | AT4G15830 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-1 | BD2G59700 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G59700 | 1 | ||
Tree-based ortholog | many-to-1 | BD2G59700 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00016G01780 | 1 | |
Anchor point | many-to-1 | CP00016G01780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00016G01780 | 1 | ||
Tree-based ortholog | many-to-1 | CP00016G01780 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV8956G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV38898G00020 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G05720 MA08G10460 | 2 | |
Tree-based ortholog | many-to-many | MA11G05720 MA08G10460 | 2 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_01G66840 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G66840 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_01G66840 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G70560 | 1 | |
Tree-based ortholog | many-to-1 | OS01G70560 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00138G00750 PP00042G00370 | 2 | |
Tree-based ortholog | many-to-many | PP00042G00370 PP00138G00750 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G45220 | 1 | |
Tree-based ortholog | many-to-1 | SI005G45220 | 1 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G080750 | 1 | |
Tree-based ortholog | many-to-1 | SL01G080750 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G044840 | 1 | |
Tree-based ortholog | many-to-1 | SB03G044840 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G02910 | 1 | |
Anchor point | many-to-1 | VV05G02910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G02910 | 1 | ||
Tree-based ortholog | many-to-many | VV01G08210 VV01G12290 VV17G00350 ... | 4 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM08G28300 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G28300 | 1 | ||
Tree-based ortholog | many-to-1 | ZM08G28300 | 1 |