Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT08G21310
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT00G04200 PT08G21240 PT08G21310 ... | 5 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT00G04200 PT16G04650 PT11G02600 ... | 11 | ||
| Tree-based ortholog | PT16G04650 PT00G04200 PT11G02600 ... | 9 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G64920 | 1 | |
| Tree-based ortholog | many-to-many | BD1G64880 BD1G64920 BD1G64910 ... | 4 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00009G01050 | 1 | |
| Tree-based ortholog | many-to-1 | CP00009G01050 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV8375G00010 HV2560691G00010 HV41664G00010 ... | 4 | |
| Tree-based ortholog | many-to-many | HV2560691G00010 HV81779G00010 HV41664G00010 ... | 4 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA09G16920 MA03G08350 MA03G08340 ... | 4 | |
| Tree-based ortholog | many-to-many | MA03G08340 MA03G08350 MA03G08360 ... | 4 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G17630 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_03G17630 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G18850 | 1 | |
| Tree-based ortholog | many-to-1 | OS03G18850 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00022G01810 PP00139G00260 PP00002G02210 ... | 4 | |
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI009G44840 SI009G44830 | 2 | |
| Tree-based ortholog | many-to-many | SI009G44840 SI009G44850 SI009G44830 | 3 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL09G091000 SL09G090970 SL09G090980 ... | 4 | |
| Tree-based ortholog | many-to-many | SL03G117450 SL03G117460 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SB01G037970 SB01G037960 SB01G037950 ... | 4 | |
| Tree-based ortholog | many-to-many | SB01G037960 SB01G037950 SB01G037940 ... | 4 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV05G12090 VV05G12110 VV05G12120 ... | 8 | |
| Tree-based ortholog | many-to-many | VV05G12110 VV05G12100 VV05G12090 ... | 9 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G12820 | 1 | |
| Tree-based ortholog | many-to-many | ZM01G12820 ZM01G12840 | 2 |