Integrative Orthology Viewer: PT08G18600 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G18600 | 1 | |
Anchor point | PT01G34360 PT10G04690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT10G04690 PT08G18600 | 2 | ||
Tree-based ortholog | PT08G18600 PT10G04690 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-many | AT1G12990 AT1G67880 AT3G26445 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G12990 | 1 | ||
Tree-based ortholog | many-to-many | AT1G12990 AT3G26445 AT1G67880 | 3 | ||
Brachypodium distachyon | Anchor point | many-to-many | BD5G13460 BD3G47640 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G47640 | 1 | ||
Tree-based ortholog | many-to-many | BD5G13460 BD3G47640 | 2 | ||
Carica papaya | Anchor point | many-to-1 | CP00033G00330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00033G00330 | 1 | ||
Tree-based ortholog | many-to-1 | CP00033G00330 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV81913G00010 | 1 | |
Tree-based ortholog | many-to-many | HV275792G00010 HV81913G00010 | 2 | ||
Musa acuminata | Anchor point | many-to-1 | MA06G28770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA09G07690 MA08G29290 MA11G19760 ... | 4 | ||
Tree-based ortholog | many-to-many | MA09G07690 MA06G28770 MA08G29290 ... | 6 | ||
Oryza sativa ssp. indica | Anchor point | many-to-many | OSINDICA_04G32000 OSINDICA_02G36880 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G36880 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_04G32000 OSINDICA_04G32010 OSINDICA_02G36900 ... | 4 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-many | OS04G40150 OS02G38140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G38140 | 1 | ||
Tree-based ortholog | many-to-many | OS04G40150 OS02G38160 OS02G38140 | 3 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00044G01370 PP00018G00320 | 2 | |
Tree-based ortholog | many-to-many | PP00044G01370 PP00018G00320 | 2 | ||
Setaria italica | Anchor point | many-to-many | SI001G22830 SI007G14380 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI007G14380 | 1 | ||
Tree-based ortholog | many-to-many | SI007G14380 SI001G22830 | 2 | ||
Solanum lycopersicum | Anchor point | many-to-1 | SL05G013580 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL12G035470 SL02G093430 | 2 | ||
Tree-based ortholog | many-to-1 | SL05G013580 | 1 | ||
Sorghum bicolor | Anchor point | many-to-many | SB06G020110 SB04G024790 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G020110 | 1 | ||
Tree-based ortholog | many-to-many | SB06G020110 SB04G024790 | 2 | ||
Vitis vinifera | Anchor point | many-to-many | VV01G00020 VV14G10870 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G00020 | 1 | ||
Tree-based ortholog | many-to-1 | VV01G00020 | 1 | ||
Zea mays | Anchor point | many-to-many | ZM04G17800 ZM05G32640 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM04G17800 ZM05G32640 | 2 | ||
Tree-based ortholog | many-to-many | ZM02G12290 ZM04G17800 ZM05G32640 | 3 |