Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT08G17560
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT08G17560 | 1 |  |
| Anchor point | PT10G05940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT10G06020 PT10G05940 PT10G05990 ... | 9 | ||
| Tree-based ortholog | PT10G05970 PT10G06020 PT10G05990 ... | 8 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G60420 | 1 | |
| Tree-based ortholog | many-to-1 | AT1G60420 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-many | BD1G23520 BD1G60260 | 2 | |
| Tree-based ortholog | many-to-many | BD1G60260 BD1G23520 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00069G00540 | 1 | |
| Tree-based ortholog | many-to-1 | CP00069G00540 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR02G04640 CR02G04710 | 2 | |
| Tree-based ortholog | many-to-many | CR02G04640 CR02G04710 CR02G04650 | 3 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV72985G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV72985G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA03G10460 | 1 | |
| Tree-based ortholog | many-to-1 | MA03G10460 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G27440 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_03G27440 OSINDICA_03G27500 OSINDICA_11G09270 ... | 4 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G29190 | 1 | |
| Tree-based ortholog | many-to-many | OS03G29190 OS03G29240 OS11G11440 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G38230 | 1 | |
| Tree-based ortholog | many-to-many | SI009G38220 SI009G38230 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G005460 | 1 | |
| Tree-based ortholog | many-to-1 | SL05G005470 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G032910 | 1 | |
| Tree-based ortholog | many-to-many | SB01G032890 SB01G032910 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV01G11270 VV01G11350 VV01G11280 ... | 4 | |
| Tree-based ortholog | many-to-many | VV01G11350 VV01G11280 VV01G11330 ... | 4 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G17740 | 1 | |
| Tree-based ortholog | many-to-many | ZM01G17740 ZM01G17770 | 2 |