Integrative Orthology Viewer: PT08G17040 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G17040 PT10G06750 | 2 | |
Anchor point | PT10G06750 PT02G25860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT10G06750 PT08G17040 | 2 | ||
Tree-based ortholog | PT10G06750 PT08G17040 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G33410 AT4G14300 | 2 | |
Anchor point | many-to-many | AT2G33410 AT4G14300 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G33410 | 1 | ||
Tree-based ortholog | many-to-many | AT2G33410 AT4G14300 | 2 | ||
Brachypodium distachyon | Anchor point | many-to-1 | BD3G28430 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G28430 | 1 | ||
Tree-based ortholog | many-to-1 | BD3G28430 | 1 | ||
Carica papaya | Anchor point | many-to-1 | CP00165G00450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00012G02030 | 1 | ||
Tree-based ortholog | many-to-1 | CP04800G00010 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G04560 | 1 | |
Tree-based ortholog | many-to-1 | CR16G04540 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-1 | HV140192G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV140192G00010 | 1 | ||
Tree-based ortholog | many-to-1 | HV140192G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA01G11320 | 1 | |
Tree-based ortholog | many-to-many | MA10G08050 MA01G11320 MA05G18210 | 3 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G31850 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_07G31850 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS10G33230 | 1 | |
Anchor point | many-to-1 | OS10G33230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS10G33230 | 1 | ||
Tree-based ortholog | many-to-1 | OS10G33230 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL05G01650 | 1 | |
Tree-based ortholog | many-to-1 | OL05G01650 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00028G01950 PP00084G00250 | 2 | |
Tree-based ortholog | many-to-many | PP00028G01950 PP00084G00250 | 2 | ||
Setaria italica | Anchor point | many-to-1 | SI009G23250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G23250 | 1 | ||
Tree-based ortholog | many-to-1 | SI009G23250 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G090520 | 1 | |
Anchor point | many-to-1 | SL09G090520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G090520 | 1 | ||
Tree-based ortholog | many-to-many | SL03G005680 SL09G090520 | 2 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SB02G005620 SB02G005670 | 2 | |
Tree-based ortholog | many-to-many | SB02G005670 SB02G005620 SB02G037690 ... | 4 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G08780 | 1 | |
Anchor point | many-to-many | VV05G08780 VV07G11420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G08780 | 1 | ||
Tree-based ortholog | many-to-1 | VV05G08780 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM05G10320 | 1 | |
Anchor point | many-to-1 | ZM01G42400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM01G42400 ZM05G10320 | 2 | ||
Tree-based ortholog | many-to-many | ZM01G42400 ZM05G10320 | 2 |