Integrative Orthology Viewer: PT08G16780 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G16780 | 1 | |
Anchor point | PT08G02400 PT10G23620 PT10G07060 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | PT08G16780 | 1 | ||
Tree-based ortholog | PT08G16780 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-many | AT4G14350 AT3G23310 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT4G14350 AT3G23310 | 2 | ||
Tree-based ortholog | 1-to-1 | AT4G14350 | 1 | ||
Brachypodium distachyon | Anchor point | many-to-many | BD5G09210 BD3G28710 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G20200 | 1 | ||
Tree-based ortholog | 1-to-1 | BD3G28710 | 1 | ||
Carica papaya | Anchor point | many-to-many | CP00005G00550 CP00165G00210 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00678G00010 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00678G00010 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G06520 | 1 | |
Tree-based ortholog | 1-to-1 | CR01G06520 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV1558321G00010 | 1 | |
Tree-based ortholog | 1-to-1 | HV5808G00010 | 1 | ||
Musa acuminata | Anchor point | many-to-many | MA05G03970 MA10G15910 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA04G22600 MA05G03970 | 2 | ||
Tree-based ortholog | 1-to-many | MA05G03970 MA04G22600 | 2 | ||
Oryza sativa ssp. indica | Anchor point | many-to-many | OSINDICA_04G25590 OSINDICA_10G24210 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_10G24210 | 1 | ||
Tree-based ortholog | 1-to-1 | OSINDICA_10G24210 | 1 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-many | OS04G33500 OS10G33640 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G43570 | 1 | ||
Tree-based ortholog | 1-to-1 | OS10G33640 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G00840 | 1 | |
Tree-based ortholog | 1-to-1 | OL09G00840 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00086G00470 PP00087G00510 PP00022G02350 | 3 | |
Tree-based ortholog | 1-to-many | PP00086G00430 PP00022G02330 PP00011G01550 ... | 7 | ||
Setaria italica | Anchor point | many-to-many | SI009G22990 SI007G09330 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI003G39480 | 1 | ||
Tree-based ortholog | 1-to-1 | SI009G22990 | 1 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL09G009380 SL10G083500 SL06G008330 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G090200 | 1 | ||
Tree-based ortholog | 1-to-1 | SL09G090200 | 1 | ||
Sorghum bicolor | Anchor point | many-to-1 | SB06G015430 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB09G025200 | 1 | ||
Tree-based ortholog | 1-to-1 | SB01G019410 | 1 | ||
Vitis vinifera | Anchor point | many-to-many | VV05G08380 VV06G08100 VV07G11160 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G08380 | 1 | ||
Tree-based ortholog | 1-to-1 | VV05G08380 | 1 | ||
Zea mays | Anchor point | many-to-1 | ZM02G16220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G29190 | 1 | ||
Tree-based ortholog | 1-to-1 | ZM01G42240 | 1 |