Integrative Orthology Viewer: PT08G15230 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G15230 | 1 | |
Anchor point | PT10G08790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT08G15230 PT10G08790 | 2 | ||
Tree-based ortholog | PT10G08790 PT08G15230 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT3G22420 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G04910 | 1 | ||
Tree-based ortholog | many-to-many | AT3G04910 AT5G28080 | 2 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD1G23970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G23970 | 1 | ||
Tree-based ortholog | many-to-1 | BD1G23970 | 1 | ||
Carica papaya | Anchor point | 1-to-1 | CP00058G01060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00058G01060 | 1 | ||
Tree-based ortholog | many-to-1 | CP00058G01060 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR01G08700 CR01G08690 | 2 | |
Tree-based ortholog | many-to-many | CR06G13920 CR14G03650 CR01G08700 ... | 5 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV38697G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV38697G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA09G11340 MA08G15930 | 2 | |
Tree-based ortholog | many-to-many | MA09G11340 MA08G15930 MA09G25960 ... | 4 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_07G30850 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G30850 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_07G30850 OSINDICA_07G07010 | 2 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS07G38530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G38530 | 1 | ||
Tree-based ortholog | many-to-many | OS07G38530 OS07G08750 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL08G00140 | 1 | |
Tree-based ortholog | many-to-1 | OL08G00140 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00384G00020 | 1 | |
Tree-based ortholog | many-to-many | PP00384G00020 PP00237G00010 | 2 | ||
Setaria italica | Anchor point | 1-to-1 | SI002G37100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G37100 | 1 | ||
Tree-based ortholog | many-to-many | SI002G05810 SI002G37100 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL09G076000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G076000 | 1 | ||
Tree-based ortholog | many-to-many | SL09G076000 SL01G097840 | 2 | ||
Sorghum bicolor | Anchor point | 1-to-1 | SB02G037070 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G037070 | 1 | ||
Tree-based ortholog | many-to-many | SB02G004750 SB02G037070 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV05G04800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G04800 | 1 | ||
Tree-based ortholog | many-to-many | VV05G04800 VV14G03560 | 2 | ||
Zea mays | Anchor point | 1-to-1 | ZM02G37370 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G37370 | 1 | ||
Tree-based ortholog | many-to-many | ZM07G24990 ZM02G37370 | 2 |