Integrative Orthology Viewer: PT08G14090 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G14090 | 1 | |
Anchor point | PT10G10070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT10G10070 PT08G14090 | 2 | ||
Tree-based ortholog | PT08G14090 PT10G10070 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-many | AT1G14630 AT2G01990 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT2G01990 AT1G14630 | 2 | ||
Tree-based ortholog | many-to-many | AT2G01990 AT1G14630 | 2 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD3G37860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G31740 | 1 | ||
Tree-based ortholog | many-to-many | BD3G37860 BD4G31740 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP30279G00010 | 1 | |
Tree-based ortholog | many-to-1 | CP30279G00020 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV276337G00010 | 1 | |
Tree-based ortholog | many-to-many | HV135330G00010 HV276337G00010 | 2 | ||
Musa acuminata | Anchor point | 1-to-1 | MA03G07790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA03G07790 MA07G02430 MA08G23460 | 3 | ||
Tree-based ortholog | many-to-many | MA03G07790 MA08G23460 MA07G02430 | 3 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_08G34510 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G21770 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_08G34510 OSINDICA_09G21770 | 2 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS08G36380 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G27590 | 1 | ||
Tree-based ortholog | many-to-many | OS08G36380 OS09G27590 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00137G00800 PP00082G00080 PP00423G00010 ... | 8 | |
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G23100 | 1 | |
Tree-based ortholog | many-to-many | SI006G17720 SI002G23100 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL01G005010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G005010 | 1 | ||
Tree-based ortholog | many-to-1 | SL01G005010 | 1 | ||
Sorghum bicolor | Anchor point | 1-to-1 | SB07G022690 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G026180 | 1 | ||
Tree-based ortholog | many-to-many | SB07G022690 SB02G026180 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV01G05140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G05140 | 1 | ||
Tree-based ortholog | many-to-1 | VV01G05140 | 1 | ||
Zea mays | Anchor point | 1-to-1 | ZM01G34810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G15690 | 1 | ||
Tree-based ortholog | many-to-many | ZM01G34810 ZM07G15690 ZM02G31540 | 3 |