Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT08G12000
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT08G12000 | 1 |  |
| Anchor point | PT10G12580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT10G12580 PT08G12000 | 2 | ||
| Tree-based ortholog | PT10G12580 PT08G12000 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-1 | AT1G68560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G68560 | 1 | ||
| Tree-based ortholog | many-to-many | AT3G45940 AT1G68560 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G02070 | 1 | |
| Tree-based ortholog | many-to-1 | BD2G02070 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00001G01770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00001G01770 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00001G01770 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G10700 | 1 | |
| Tree-based ortholog | many-to-1 | CR03G11560 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV118145G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV118145G00010 | 1 | ||
| Musa acuminata | Anchor point | 1-to-1 | MA01G21750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA01G21750 | 1 | ||
| Tree-based ortholog | many-to-1 | MA01G21750 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_01G03360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G03360 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_01G03360 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS01G03950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G03950 | 1 | ||
| Tree-based ortholog | many-to-1 | OS01G03950 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL08G02650 | 1 | |
| Tree-based ortholog | many-to-many | OL08G02650 OL04G02410 OL05G03060 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00013G02430 PP00043G00100 PP00157G00350 ... | 11 | |
| Tree-based ortholog | many-to-many | PP00281G00070 PP00245G00510 PP00043G00100 ... | 10 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G09050 | 1 | |
| Tree-based ortholog | many-to-1 | SI005G09050 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL04G007150 SL05G009470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G009470 | 1 | ||
| Tree-based ortholog | many-to-many | SL05G009470 SL04G007150 | 2 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB03G007230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G007230 | 1 | ||
| Tree-based ortholog | many-to-1 | SB03G007230 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV01G07830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G07830 | 1 | ||
| Tree-based ortholog | many-to-1 | VV01G07830 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM03G06140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G06140 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM03G06140 | 1 |